WormBase Tree Display for Gene: WBGene00000979
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WBGene00000979 | SMap | S_parent | Sequence | C10F3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dhs-16 | Person_evidence | WBPerson651 | |||||
Sequence_name | C10F3.2 | ||||||||
Molecular_name | C10F3.2 | ||||||||
C10F3.2.1 | |||||||||
CE08067 | |||||||||
Other_name | CELE_C10F3.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | dhs-16 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dhs | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (48) | |||||||||
Paralog (38) | |||||||||
Structured_description | Concise_description | dhs-16 encodes a short-chain dehydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables steroid dehydrogenase activity. Involved in steroid catabolic process. Predicted to be located in intracellular membrane-bounded organelle. Expressed in head neurons; hypodermis; tail neurons; and terminal bulb. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 13; fundus albipunctatus; and night blindness. Is an ortholog of several human genes including DHRS9 (dehydrogenase/reductase 9); HSD17B6 (hydroxysteroid 17-beta dehydrogenase 6); and RDH5 (retinol dehydrogenase 5). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080257 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29958) | ||||
DOID:11105 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
DOID:8499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
Molecular_info | Corresponding_CDS | C10F3.2 | |||||||
Corresponding_transcript | C10F3.2.1 | ||||||||
Other_sequence | HC05403 | ||||||||
JI176077.1 | |||||||||
JI175279.1 | |||||||||
ASC14659_1 | |||||||||
JI169223.1 | |||||||||
Dviv_isotig28622 | |||||||||
MI04815 | |||||||||
FE908226.1 | |||||||||
Oden_isotig19439 | |||||||||
JF753272.1 | |||||||||
HCC06966_1 | |||||||||
MIC03686_1 | |||||||||
FE906782.1 | |||||||||
JI171747.1 | |||||||||
JO475123.1 | |||||||||
JI480316.1 | |||||||||
Associated_feature | WBsf231823 | ||||||||
WBsf231824 | |||||||||
Experimental_info | RNAi_result | WBRNAi00010600 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040301 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102767 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040302 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028781 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr10029 | ||||||||
Expr1028327 | |||||||||
Expr1030610 | |||||||||
Expr1144375 | |||||||||
Expr2010899 | |||||||||
Expr2029138 | |||||||||
Drives_construct | WBCnstr00014804 | ||||||||
WBCnstr00037163 | |||||||||
Construct_product | WBCnstr00014804 | ||||||||
WBCnstr00037163 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (162) | |||||||||
Interaction (18) | |||||||||
Map_info | Map | V | Position | -0.47285 | Error | 0.012515 | |||
Positive | Positive_clone | C10F3 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5213 | |||||||
4142 | |||||||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |