WormBase Tree Display for Gene: WBGene00000979

WBGene00000979 SMap: S_parent: Sequence: C10F3
  Identity: Version: 1
    Name: CGC_name: dhs-16 Person_evidence: WBPerson651
      Sequence_name: C10F3.2
      Molecular_name: C10F3.2
        C10F3.2.1
        CE08067
      Other_name: CELE_C10F3.2 Accession_evidence: NDB BX284605
      Public_name: dhs-16
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhs
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog: WBGene00058837 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00030887 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00143154 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00091428 Pristionchus pacificus From_analysis: OMA
      CBOVI.g2239 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10213 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g15853 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g7434 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g8780 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21344 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18481 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17837 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22545 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11796 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15665 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2054 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24552 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01479.g16457 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dhs-16 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold491.g2082 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00241.g7768 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17170 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017846 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00202 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9139 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50204600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14354 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00218656 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00093875 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110191 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258265 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292065 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0033679 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0262112 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            SonicParanoid
      ZFIN:ZDB-GENE-030131-1249 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-050208-411 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:9940 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:29674 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23316 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:16888 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:29958 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1351670 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1917311 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2442798 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:620655 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:628716 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:708343 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308849 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (38)
    Structured_description: Concise_description: dhs-16 encodes a short-chain dehydrogenase predicted to be mitochondrial. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables steroid dehydrogenase activity. Involved in steroid catabolic process. Predicted to be located in intracellular membrane-bounded organelle. Expressed in head neurons; hypodermis; tail neurons; and terminal bulb. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 13; fundus albipunctatus; and night blindness. Is an ortholog of several human genes including DHRS9 (dehydrogenase/reductase 9); HSD17B6 (hydroxysteroid 17-beta dehydrogenase 6); and RDH5 (retinol dehydrogenase 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080257 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:29958)
      DOID:11105 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9940)
      DOID:8499 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9940)
  Molecular_info: Corresponding_CDS: C10F3.2
    Corresponding_transcript: C10F3.2.1
    Other_sequence (16)
    Associated_feature: WBsf231823
      WBsf231824
  Experimental_info: RNAi_result: WBRNAi00010600 Inferred_automatically: RNAi_primary
      WBRNAi00040301 Inferred_automatically: RNAi_primary
      WBRNAi00102767 Inferred_automatically: RNAi_primary
      WBRNAi00040302 Inferred_automatically: RNAi_primary
      WBRNAi00028781 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10029
      Expr1028327
      Expr1030610
      Expr1144375
      Expr2010899
      Expr2029138
    Drives_construct: WBCnstr00014804
      WBCnstr00037163
    Construct_product: WBCnstr00014804
      WBCnstr00037163
    Microarray_results (20)
    Expression_cluster (162)
    Interaction (18)
  Map_info: Map: V Position: -0.47285 Error: 0.012515
    Positive: Positive_clone: C10F3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5213
        4142
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene