WormBase Tree Display for Gene: WBGene00000931
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WBGene00000931 | SMap | S_parent | Sequence | C25A1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dao | ||||||
Allele (34) | |||||||
Strain | WBStrain00035691 | ||||||
WBStrain00030111 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (20) | |||||||
Ortholog (17) | |||||||
Structured_description | Concise_description | dao-5 encodes a predicted nucleolar phosphoprotein related to Saccharomyces cerevisiae SRP40 and the vertebrate Nopp140 proteins that may play a role in rRNA gene transcription and nucleolar structural organization; dao-5 expression is negatively regulated by the DAF-2/insulin-like receptor and positively regulated by the DAF-16/fork-head transcription factor, suggesting that dao-5 may be involved in life-span determination; dao-5 is strongly expressed in dauer larvae; DAO-5 localizes to nucleoli. | Paper_evidence | WBPaper00005073 | |||
WBPaper00013265 | |||||||
WBPaper00041268 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 16 Nov 2012 00:00:00 | ||||||
Automated_description | Enables RNA polymerase I core binding activity and rDNA binding activity. Involved in several processes, including determination of adult lifespan; insulin receptor signaling pathway; and nucleolar large rRNA transcription by RNA polymerase I. Located in nucleolus and nucleoplasm. Expressed in germline precursor cell; gonadal sheath cell; hypodermis; and somatic cell. Is an ortholog of human NOLC1 (nucleolar and coiled-body phosphoprotein 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C25A1.10a | |||||
C25A1.10b | |||||||
Corresponding_transcript | C25A1.10a.1 | ||||||
C25A1.10b.1 | |||||||
Other_sequence (52) | |||||||
Associated_feature | WBsf649557 | ||||||
WBsf664843 | |||||||
WBsf664844 | |||||||
WBsf220205 | |||||||
WBsf220206 | |||||||
WBsf220207 | |||||||
Transcription_factor | WBTranscriptionFactor000159 | ||||||
Experimental_info | RNAi_result | WBRNAi00003005 | Inferred_automatically | RNAi_primary | |||
WBRNAi00075870 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041137 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr5332 | ||||||
Expr10101 | |||||||
Expr11751 | |||||||
Expr1017844 | |||||||
Expr1030580 | |||||||
Expr1145169 | |||||||
Expr1200377 | |||||||
Expr2010789 | |||||||
Expr2029026 | |||||||
Drives_construct | WBCnstr00003692 | ||||||
WBCnstr00019427 | |||||||
WBCnstr00037193 | |||||||
Construct_product | WBCnstr00019250 | ||||||
WBCnstr00019427 | |||||||
WBCnstr00020269 | |||||||
WBCnstr00037193 | |||||||
Antibody | WBAntibody00002179 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (149) | |||||||
Interaction (292) | |||||||
Map_info | Map | I | Position | 4.73079 | Error | 0.002326 | |
Positive | Positive_clone | C25A1 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4147 | |||||
4252 | |||||||
4312 | |||||||
Pseudo_map_position | |||||||
Reference (14) | |||||||
Remark | Sequence connection from [Yu H, Larsen PL], [krb 020711] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |