WormBase Tree Display for Gene: WBGene00000891
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| WBGene00000891 | SMap | S_parent | Sequence | Y87G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cyn-15 | Person_evidence | WBPerson466 | |||||
| Sequence_name | Y87G2A.6 | ||||||||
| Molecular_name | Y87G2A.6 | ||||||||
| Y87G2A.6.1 | |||||||||
| CE24686 | |||||||||
| Other_name | cyp-15 | Person_evidence | WBPerson466 | ||||||
| CELE_Y87G2A.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | cyn-15 | ||||||||
| DB_info | Database | AceView | gene | 1O158 | |||||
| WormQTL | gene | WBGene00000891 | |||||||
| WormFlux | gene | WBGene00000891 | |||||||
| NDB | locus_tag | CELE_Y87G2A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000891|UniProtKB=Q9U1Q3 | |||||||
| family | PTHR45625 | ||||||||
| NCBI | gene | 173225 | |||||||
| RefSeq | protein | NM_060977.5 | |||||||
| TREEFAM | TREEFAM_ID | TF105686 | |||||||
| TrEMBL | UniProtAcc | Q9U1Q3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U1Q3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 20 Sep 2004 16:20:03 | WBPerson1971 | Name_change | CGC_name | cyp-15 -> cyn-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyn | ||||||||
| Allele (73) | |||||||||
| Legacy_information | [Page AP] Y87G2A.6. No mutants known. | ||||||||
| Component_of_genotype | WBGenotype00000120 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098269 | ||||||||
| 00107959 | |||||||||
| 00107960 | |||||||||
| Ortholog (33) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | cyn-15 encodes a little-characterized cyclophilin homolog. | Paper_evidence | WBPaper00026884 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 20 Mar 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is an ortholog of human PPWD1 (peptidylprolyl isomerase domain and WD repeat containing 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Modifies_disease | DOID:0110403 | ||||||||
| Modifies_disease_in_annotation | WBDOannot00001212 | ||||||||
| Molecular_info | Corresponding_CDS | Y87G2A.6 | |||||||
| Corresponding_transcript | Y87G2A.6.1 | ||||||||
| Other_sequence (78) | |||||||||
| Associated_feature | WBsf649706 | ||||||||
| WBsf220518 | |||||||||
| WBsf220519 | |||||||||
| WBsf220520 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1023082 | ||||||||
| Expr1030556 | |||||||||
| Expr1162031 | |||||||||
| Expr2010666 | |||||||||
| Expr2028906 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | I | Position | 21.4844 | Error | 0.006708 | |||
| Positive | Positive_clone | Y87G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026884 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059062 | |||||||||
| Remark | This gene has been renamed with approval of the CGC (cyp-15->cyn-15) | Person_evidence | WBPerson466 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
