WormBase Tree Display for Gene: WBGene00000818

WBGene00000818 SMap: S_parent: Sequence: Y67H2A
  Identity: Version: 1
    Name: CGC_name: csn-6 Person_evidence: WBPerson57
      Sequence_name: Y67H2A.6
      Molecular_name: Y67H2A.6a
        Y67H2A.6a.1
        CE28377
        Y67H2A.6b
        CE43901
        Y67H2A.6b.1
      Other_name: CELE_Y67H2A.6 Accession_evidence: NDB BX284604
      Public_name: csn-6
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: csn
    Allele (52)
    Strain: WBStrain00036363
    RNASeq_FPKM (74)
    GO_annotation: 00088001
      00088002
      00088003
      00088004
      00088005
      00088006
      00088007
      00088008
      00107839
      00107840
    Contained_in_operon: CEOP4538
    Ortholog (30)
    Paralog: WBGene00001229 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004464 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: csn-6 encodes a homolog of COP9 signalosome complex subunit 2 that affects embryonic viability and fertility. Paper_evidence: WBPaper00004651
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable metallopeptidase activity. Predicted to be involved in oogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be part of COP9 signalosome. Is an ortholog of human COPS6 (COP9 signalosome subunit 6). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y67H2A.6a
      Y67H2A.6b
    Corresponding_transcript: Y67H2A.6a.1
      Y67H2A.6b.1
    Other_sequence: CBC15800_1
      CJC14366_1
      CR01778
      CBC03745_1
      CR09077
      CJC14725_1
      CRC00426_1
    Associated_feature: WBsf229411
      WBsf229412
      WBsf229413
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr1025433
      Expr1030509
      Expr1161433
      Expr2010555
      Expr2028795
    Microarray_results (18)
    Expression_cluster (87)
    Interaction: WBInteraction000036025
      WBInteraction000114255
      WBInteraction000158004
      WBInteraction000158843
      WBInteraction000158847
      WBInteraction000159048
      WBInteraction000169116
      WBInteraction000169199
      WBInteraction000169494
      WBInteraction000172996
      WBInteraction000173002
      WBInteraction000173004
      WBInteraction000173011
      WBInteraction000173012
      WBInteraction000173013
      WBInteraction000224835
      WBInteraction000504468
      WBInteraction000518081
      WBInteraction000518123
      WBInteraction000518171
      WBInteraction000518201
      WBInteraction000518253
      WBInteraction000518287
      WBInteraction000522729
      WBInteraction000522735
      WBInteraction000523022
      WBInteraction000523026
      WBInteraction000542774
      WBInteraction000542803
      WBInteraction000542804
      WBInteraction000559677
      WBInteraction000564926
      WBInteraction000568758
      WBInteraction000568940
      WBInteraction000574905
      WBInteraction000579476
  Map_info: Map: IV Position: 8.5177 Error: 0.00116
    Positive: Positive_clone: Y67H2A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5570
        4297
    Pseudo_map_position
  Reference: WBPaper00005914
    WBPaper00029237
    WBPaper00033494
    WBPaper00034645
    WBPaper00038491
    WBPaper00055090
    WBPaper00061750
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene