WormBase Tree Display for Gene: WBGene00000768
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| WBGene00000768 | SMap | S_parent | Sequence | R01H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cor-1 | Person_evidence | WBPerson26 | |||||
| Sequence_name | R01H10.3 | ||||||||
| Molecular_name | R01H10.3a | ||||||||
| R01H10.3a.1 | |||||||||
| CE00590 | |||||||||
| R01H10.3b | |||||||||
| CE30350 | |||||||||
| R01H10.3c | |||||||||
| CE30351 | |||||||||
| R01H10.3b.1 | |||||||||
| R01H10.3c.1 | |||||||||
| Other_name | CELE_R01H10.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cor-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cor | ||||||||
| Allele (69) | |||||||||
| Strain | WBStrain00035928 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072201 | ||||||||
| 00072202 | |||||||||
| 00072203 | |||||||||
| 00072204 | |||||||||
| 00072205 | |||||||||
| 00072206 | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00004075 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The cor-1 gene encodes an ortholog of the actin-binding protein coronin. | Paper_evidence | WBPaper00003758 | |||||
| WBPaper00004808 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be located in cytoplasm and cytoskeleton. Expressed in several structures, including QL.a; QL.pa; QR.a; QR.pa; and oxygen sensory neurons. Human ortholog(s) of this gene implicated in coronin-1A deficiency. Is an ortholog of several human genes including CORO1A (coronin 1A); CORO1B (coronin 1B); and CORO1C (coronin 1C). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:13207 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2254) | ||||
| DOID:0060019 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2252) | ||||||
| Molecular_info | Corresponding_CDS | R01H10.3a | |||||||
| R01H10.3b | |||||||||
| R01H10.3c | |||||||||
| Corresponding_CDS_history | R01H10.3d:wp275 | ||||||||
| Corresponding_transcript | R01H10.3a.1 | ||||||||
| R01H10.3b.1 | |||||||||
| R01H10.3c.1 | |||||||||
| Other_sequence (87) | |||||||||
| Associated_feature | WBsf645551 | ||||||||
| WBsf645552 | |||||||||
| WBsf993944 | |||||||||
| WBsf993945 | |||||||||
| WBsf993946 | |||||||||
| WBsf1015755 | |||||||||
| WBsf1015756 | |||||||||
| WBsf225687 | |||||||||
| WBsf225688 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065639 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114639 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051102 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017298 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006146 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080540 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11168 | ||||||||
| Expr1028824 | |||||||||
| Expr1030473 | |||||||||
| Expr1154809 | |||||||||
| Expr2010468 | |||||||||
| Expr2028708 | |||||||||
| Construct_product | WBCnstr00019602 | ||||||||
| WBCnstr00019604 | |||||||||
| WBCnstr00019605 | |||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (102) | |||||||||
| Map_info | Map | III | Position | 2.06495 | Error | 0.011878 | |||
| Positive | Positive_clone | R01H10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024200 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044076 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059953 | |||||||||
| WBPaper00061290 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Sequence connection from [Rappleye CA, Aroian RV] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
