WormBase Tree Display for Gene: WBGene00000768
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WBGene00000768 | SMap | S_parent | Sequence | R01H10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cor | ||||||
Allele (69) | |||||||
Strain | WBStrain00035928 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00072201 | ||||||
00072202 | |||||||
00072203 | |||||||
00072204 | |||||||
00072205 | |||||||
00072206 | |||||||
Ortholog (48) | |||||||
Paralog | WBGene00004075 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | The cor-1 gene encodes an ortholog of the actin-binding protein coronin. | Paper_evidence | WBPaper00003758 | |||
WBPaper00004808 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be located in cytoplasm and cytoskeleton. Expressed in several structures, including QL.a; QL.pa; QR.a; QR.pa; and oxygen sensory neurons. Human ortholog(s) of this gene implicated in coronin-1A deficiency. Is an ortholog of several human genes including CORO1A (coronin 1A); CORO1B (coronin 1B); and CORO1C (coronin 1C). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:13207 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2254) | ||
DOID:0060019 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2252) | ||||
Molecular_info | Corresponding_CDS | R01H10.3a | |||||
R01H10.3b | |||||||
R01H10.3c | |||||||
Corresponding_CDS_history | R01H10.3d:wp275 | ||||||
Corresponding_transcript | R01H10.3a.1 | ||||||
R01H10.3b.1 | |||||||
R01H10.3c.1 | |||||||
Other_sequence (87) | |||||||
Associated_feature | WBsf645551 | ||||||
WBsf645552 | |||||||
WBsf993944 | |||||||
WBsf993945 | |||||||
WBsf993946 | |||||||
WBsf1015755 | |||||||
WBsf1015756 | |||||||
WBsf225687 | |||||||
WBsf225688 | |||||||
Experimental_info | RNAi_result | WBRNAi00065639 | Inferred_automatically | RNAi_primary | |||
WBRNAi00114639 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051102 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017298 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006146 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080540 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11168 | ||||||
Expr1028824 | |||||||
Expr1030473 | |||||||
Expr1154809 | |||||||
Expr2010468 | |||||||
Expr2028708 | |||||||
Construct_product | WBCnstr00019602 | ||||||
WBCnstr00019604 | |||||||
WBCnstr00019605 | |||||||
Microarray_results (38) | |||||||
Expression_cluster (156) | |||||||
Interaction (102) | |||||||
Map_info | Map | III | Position | 2.06495 | Error | 0.011878 | |
Positive | Positive_clone | R01H10 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00024200 | ||||||
WBPaper00038491 | |||||||
WBPaper00044076 | |||||||
WBPaper00055090 | |||||||
WBPaper00059953 | |||||||
WBPaper00061290 | |||||||
WBPaper00063976 | |||||||
Remark | Sequence connection from [Rappleye CA, Aroian RV] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |