WormBase Tree Display for Gene: WBGene00000675
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WBGene00000675 | Evidence | Person_evidence | WBPerson345 | ||||
---|---|---|---|---|---|---|---|
WBPerson651 | |||||||
SMap | S_parent | Sequence | K02D7 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | col | ||||||
Allele (41) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00033884 | ||||||
00033885 | |||||||
00033886 | |||||||
00107669 | |||||||
Ortholog (26) | |||||||
Paralog (163) | |||||||
Structured_description | Concise_description | col-101 encodes a cuticle collagen; loss of col-101 via large-scale RNAi screens results in animals that are pale and slow growing. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 29 Mar 2007 00:00:00 | ||||||
Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K02D7.3a | |||||
K02D7.3b | |||||||
Corresponding_CDS_history | K02D7.3:wp183 | ||||||
Corresponding_transcript | K02D7.3a.1 | ||||||
K02D7.3b.1 | |||||||
Other_sequence (20) | |||||||
Associated_feature | WBsf651616 | ||||||
WBsf229673 | |||||||
Experimental_info | RNAi_result (16) | ||||||
Expr_pattern | Expr1018214 | ||||||
Expr1030400 | |||||||
Expr1153418 | |||||||
Expr2010300 | |||||||
Expr2028542 | |||||||
Drives_construct | WBCnstr00037378 | ||||||
Construct_product | WBCnstr00037378 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (345) | |||||||
Interaction (89) | |||||||
Map_info | Map | IV | Position | -26.4968 | Error | 0.028187 | |
Positive | Positive_clone | K02D7 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00025192 | ||||||
WBPaper00032196 | |||||||
WBPaper00038491 | |||||||
WBPaper00041771 | |||||||
WBPaper00055090 | |||||||
WBPaper00059347 | |||||||
WBPaper00060970 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |