WormBase Tree Display for Gene: WBGene00000667

WBGene00000667 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: W05B2
  Identity: Version: 1
    Name: CGC_name: col-92 Person_evidence: WBPerson345
      Sequence_name: W05B2.6
      Molecular_name: W05B2.6
        W05B2.6.1
        CE20148
      Other_name: CELE_W05B2.6 Accession_evidence: NDB BX284603
      Public_name: col-92
    DB_info: Database: AceView gene 3M72
        WormQTL gene WBGene00000667
        WormFlux gene WBGene00000667
        NDB locus_tag CELE_W05B2.6
        Panther gene CAEEL|WormBase=WBGene00000667|UniProtKB=Q9XVG3
          family PTHR24637
        NCBI gene 176528
        RefSeq protein NM_067007.7
        TrEMBL UniProtAcc Q9XVG3
        UniProt_GCRP UniProtAcc Q9XVG3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele: WBVar00315695
      WBVar01500260
      WBVar01268804
      WBVar01268805
      WBVar00262803
      WBVar01499774
      WBVar02150586
      WBVar00859850
      WBVar01499870
      WBVar01499871
    RNASeq_FPKM (74)
    GO_annotation: 00102429
      00102430
      00102431
      00107662
    Ortholog (63)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Expressed in hypodermis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W05B2.6
    Corresponding_transcript: W05B2.6.1
    Other_sequence: GO252962.1
      GE638257.1
      FD516281.1
      FG580223.1
      FD517573.1
      GP00792
      FD515967.1
      GO253069.1
      Dviv_isotig25140
      FD516943.1
    Associated_feature: WBsf651490
      WBsf994219
      WBsf1015892
      WBsf227537
  Experimental_info: RNAi_result (28)
    Expr_pattern: Expr11171
      Expr1158355
      Expr2010439
      Expr2028679
    Drives_construct: WBCnstr00018196
      WBCnstr00037384
    Construct_product: WBCnstr00037384
    Microarray_results: SMD_W05B2.6
      171756_x_at
      171770_x_at
      172197_x_at
      172209_x_at
      A_12_P100465
      A_12_P113460
      A_12_P139895
      A_12_P147475
      GPL13394_WBGene00000668
      GPL13394_WBGene00000669
      GPL13914_W05B2.1
      GPL13914_W05B2.5
      GPL14144_W05B2.1_125-184_0.905_1_A
      GPL14144_W05B2.1_432-491_0.570_53_C
      GPL14144_W05B2.1_816-875_0.738_13_B
      GPL19516_CGZ0037460
      GPL19516_CGZ0038415
      GPL19516_CGZ0038424
      GPL21109_T28C6.4
      GPL21109_W05B2.1
      GPL21109_W05B2.6
      GPL3518_CE20148
      GPL8304_CE_WBGene00000594_A
      GPL8304_CE_WBGene00000667_A
      GPL8304_CE_WBGene00000691_A
      GPL8304_CE_WBGene00000699_A
      GPL8673_W05B2_1P00127
      GPL8673_W05B2_1P00245
      GPL8673_W05B2_5P00126
      GPL8673_W05B2_5P00250
      GPL8673_W05B2_5P00264
      GPL8673_W05B2_6P00032
      GPL8673_W05B2_6P00128
      GPL8673_W05B2_6P00245
      GPL9450_W05B2.1
      GPL9450_W05B2.6
      cea2.3.26256
      cea2.d.41038
      cea2.d.41039
    Expression_cluster (265)
    Interaction (103)
    WBProcess: WBbiopr:00000039
  Map_info: Map: III Position: 5.80511
    Positive: Positive_clone: W05B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042974
    WBPaper00044013
    WBPaper00055090
    WBPaper00057312
    WBPaper00065954
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene