WormBase Tree Display for Gene: WBGene00000665

WBGene00000665 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: C29E4
  Identity: Version: 1
    Name: CGC_name: col-90 Person_evidence: WBPerson345
      Sequence_name: C29E4.1
      Molecular_name: C29E4.1
        C29E4.1.1
        CE00083
      Other_name: CELE_C29E4.1 Accession_evidence: NDB BX284603
      Public_name: col-90
    DB_info: Database: AceView gene 3J39
        WormQTL gene WBGene00000665
        WormFlux gene WBGene00000665
        NDB locus_tag CELE_C29E4.1
        Panther gene CAEEL|WormBase=WBGene00000665|UniProtKB=P34340
          family PTHR24637
        NCBI gene 176117
        RefSeq protein NM_066328.6
        SwissProt UniProtAcc P34340
        TREEFAM TREEFAM_ID TF319043
        UniProt_GCRP UniProtAcc P34340
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (23)
    RNASeq_FPKM (74)
    GO_annotation: 00041752
      00041753
      00041754
      00107660
    Ortholog (32)
    Paralog (165)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29E4.1
    Corresponding_transcript: C29E4.1.1
    Other_sequence (23)
    Associated_feature: WBsf659211
      WBsf225309
      WBsf225310
      WBsf225311
      WBsf225312
      WBsf225313
  Experimental_info: RNAi_result: WBRNAi00041442 Inferred_automatically: RNAi_primary
      WBRNAi00027194 Inferred_automatically: RNAi_primary
      WBRNAi00011322 Inferred_automatically: RNAi_primary
      WBRNAi00024666 Inferred_automatically: RNAi_primary
      WBRNAi00029310 Inferred_automatically: RNAi_primary
      WBRNAi00007443 Inferred_automatically: RNAi_primary
      WBRNAi00005165 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028656
      Expr1030392
      Expr1145471
      Expr2010437
      Expr2028677
    Drives_construct: WBCnstr00037386
    Construct_product: WBCnstr00037386
    Microarray_results (19)
    Expression_cluster (322)
    Interaction: WBInteraction000029948
      WBInteraction000102548
      WBInteraction000103047
      WBInteraction000103389
      WBInteraction000104628
      WBInteraction000105286
      WBInteraction000106503
      WBInteraction000109392
      WBInteraction000109587
      WBInteraction000109967
      WBInteraction000110283
      WBInteraction000110468
      WBInteraction000110663
      WBInteraction000112181
      WBInteraction000112261
      WBInteraction000114992
      WBInteraction000115712
      WBInteraction000118210
      WBInteraction000118493
      WBInteraction000119189
      WBInteraction000119478
      WBInteraction000120140
      WBInteraction000120337
      WBInteraction000120758
      WBInteraction000120953
      WBInteraction000122149
      WBInteraction000124257
      WBInteraction000125230
      WBInteraction000133206
      WBInteraction000133249
      WBInteraction000133849
      WBInteraction000134540
      WBInteraction000134601
      WBInteraction000135459
      WBInteraction000138125
      WBInteraction000139535
      WBInteraction000140064
      WBInteraction000140726
      WBInteraction000141531
      WBInteraction000142461
      WBInteraction000142740
      WBInteraction000143508
      WBInteraction000144116
      WBInteraction000145790
      WBInteraction000146003
      WBInteraction000149920
      WBInteraction000150046
      WBInteraction000150108
      WBInteraction000150882
      WBInteraction000151004
      WBInteraction000151102
      WBInteraction000151481
      WBInteraction000157812
      WBInteraction000159929
      WBInteraction000160248
      WBInteraction000162152
      WBInteraction000163261
      WBInteraction000163665
      WBInteraction000164941
      WBInteraction000166584
      WBInteraction000170267
      WBInteraction000170425
      WBInteraction000170528
      WBInteraction000171061
      WBInteraction000171309
      WBInteraction000175400
      WBInteraction000176962
      WBInteraction000177819
      WBInteraction000178177
      WBInteraction000179286
      WBInteraction000179537
      WBInteraction000180491
      WBInteraction000181289
      WBInteraction000181436
      WBInteraction000181514
      WBInteraction000181622
      WBInteraction000186703
      WBInteraction000189298
      WBInteraction000189584
      WBInteraction000190659
      WBInteraction000190861
      WBInteraction000191130
      WBInteraction000191501
      WBInteraction000194831
      WBInteraction000195820
      WBInteraction000196322
      WBInteraction000199432
      WBInteraction000199525
      WBInteraction000199900
      WBInteraction000201952
      WBInteraction000203147
      WBInteraction000203914
      WBInteraction000207963
      WBInteraction000208698
      WBInteraction000209561
      WBInteraction000210570
      WBInteraction000211250
      WBInteraction000211910
      WBInteraction000213347
      WBInteraction000215003
      WBInteraction000219671
      WBInteraction000221385
      WBInteraction000221915
      WBInteraction000222486
      WBInteraction000223014
      WBInteraction000223375
      WBInteraction000227850
      WBInteraction000229960
      WBInteraction000230232
      WBInteraction000230432
      WBInteraction000230779
      WBInteraction000231353
      WBInteraction000232238
      WBInteraction000233396
      WBInteraction000233658
      WBInteraction000235040
      WBInteraction000238106
      WBInteraction000238343
      WBInteraction000242403
      WBInteraction000243073
      WBInteraction000247906
      WBInteraction000248103
      WBInteraction000249027
      WBInteraction000251123
      WBInteraction000253373
      WBInteraction000256680
      WBInteraction000260299
      WBInteraction000265286
      WBInteraction000265952
      WBInteraction000266187
      WBInteraction000269177
      WBInteraction000270594
      WBInteraction000277205
      WBInteraction000277593
      WBInteraction000283305
      WBInteraction000284357
      WBInteraction000286983
      WBInteraction000290129
      WBInteraction000292792
      WBInteraction000294602
      WBInteraction000295352
      WBInteraction000301164
      WBInteraction000310379
      WBInteraction000312106
      WBInteraction000315526
      WBInteraction000316669
      WBInteraction000317249
      WBInteraction000317330
      WBInteraction000319853
      WBInteraction000322904
      WBInteraction000324616
      WBInteraction000328726
      WBInteraction000331124
      WBInteraction000332227
      WBInteraction000339131
      WBInteraction000339913
      WBInteraction000340480
      WBInteraction000342234
      WBInteraction000343252
      WBInteraction000349268
      WBInteraction000356804
      WBInteraction000363959
      WBInteraction000365728
      WBInteraction000367271
      WBInteraction000370731
      WBInteraction000373515
      WBInteraction000374081
      WBInteraction000375226
      WBInteraction000375966
      WBInteraction000377488
      WBInteraction000378301
      WBInteraction000378673
      WBInteraction000389557
      WBInteraction000390936
      WBInteraction000391775
      WBInteraction000392923
      WBInteraction000401364
      WBInteraction000404540
      WBInteraction000408489
      WBInteraction000410977
      WBInteraction000414898
      WBInteraction000422171
      WBInteraction000423088
      WBInteraction000423324
      WBInteraction000424085
      WBInteraction000428242
      WBInteraction000428855
      WBInteraction000431216
      WBInteraction000433215
      WBInteraction000440524
      WBInteraction000443963
      WBInteraction000445970
      WBInteraction000448280
      WBInteraction000448722
      WBInteraction000452965
      WBInteraction000459657
      WBInteraction000471444
      WBInteraction000474548
      WBInteraction000475321
      WBInteraction000547390
      WBInteraction000557845
  Map_info: Map: III Position: -0.468837 Error: 0.001921
    Positive: Positive_clone: C29E4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00063976
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene