WormBase Tree Display for CDS: C29E4.1
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| C29E4.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C29E4 | |||
| Structure | Source_exons | 1 | 802 | |||
| 903 | 1018 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34340 | ||
| UniProt | UniProtAcc | P34340 | ||||
| UniProt_GCRP | UniProtAcc | P34340 | ||||
| AlphaFold | entry | P34340 | ||||
| NCBI_protein | GI_number | GI:351058540 | ||||
| TREEFAM | TREEFAM_ID | TF319043 | ||||
| Protein_id | CHROMOSOME_III | CCD66002 | 1 | |||
| DB_remark | COL-90 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000665 | ||||
| Corresponding_transcript | C29E4.1.1 | |||||
| Corresponding_protein | CE00083 | |||||
| Corresponding_PCR_product | TH:302B9 | |||||
| cenix:302-b9 | ||||||
| mv_C29E4.1 | ||||||
| sjj_C29E4.1 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (37) | ||||||
| RNAi_result | WBRNAi00041442 | |||||
| WBRNAi00027194 | ||||||
| WBRNAi00011322 | ||||||
| WBRNAi00024666 | ||||||
| WBRNAi00029310 | ||||||
| WBRNAi00007443 | ||||||
| WBRNAi00005165 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Putative cuticle collagen 90 | Accession_evidence | UniProt | SP:P34340 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
