WormBase Tree Display for Gene: WBGene00000642
expand all nodes | collapse all nodes | view schema
| WBGene00000642 | Evidence | Person_evidence | WBPerson345 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | ||||||||||
| SMap | S_parent | Sequence | F15D3 | |||||||
| Identity | Version | 2 | ||||||||
| Name | CGC_name | col-66 | Person_evidence | WBPerson345 | ||||||
| Sequence_name | F15D3.3 | |||||||||
| Molecular_name | F15D3.3 | |||||||||
| Other_name | CELE_F15D3.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | col-66 | |||||||||
| DB_info | Database | AceView | gene | 1M151 | ||||||
| WormQTL | gene | WBGene00000642 | ||||||||
| WormFlux | gene | WBGene00000642 | ||||||||
| NDB | locus_tag | CELE_F15D3.3 | ||||||||
| NCBI | gene | 184526 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 08 Oct 2012 11:23:55 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | col | |||||||||
| Allele (28) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; prg-1; and osm-3 based on RNA-seq and microarray studies. Is affected by five chemicals including Hydrolyzable Tannins; Colistin; and dafa#1 based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F15D3.3:wp175 | ||||||||
| F15D3.3:wp187 | ||||||||||
| F15D3.3:wp234 | ||||||||||
| Corresponding_pseudogene | F15D3.3 | |||||||||
| Other_sequence | AS08502 | |||||||||
| ASC00174_1 | ||||||||||
| Associated_feature | WBsf643727 | |||||||||
| Experimental_info | Expr_pattern | Expr1018375 | ||||||||
| Expr1148681 | ||||||||||
| Drives_construct | WBCnstr00037403 | |||||||||
| Construct_product | WBCnstr00037403 | |||||||||
| Microarray_results | 172198_x_at | |||||||||
| A_12_P115756 | ||||||||||
| A_12_P149610 | ||||||||||
| Aff_F15D3.3 | ||||||||||
| GPL14144_F15D3.3_81-140_0.858_1_A | ||||||||||
| GPL19516_CGZ0016482 | ||||||||||
| GPL21109_F15D3.3 | ||||||||||
| GPL8304_CE_WBGene00000642_B | ||||||||||
| GPL8673_F15D3_3P00574 | ||||||||||
| Expression_cluster (61) | ||||||||||
| Map_info | Map | I | Position | 9.12422 | Error | 0.030829 | ||||
| Positive | Positive_clone | F15D3 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00038491 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
