WormBase Tree Display for Pseudogene: F15D3.3
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| F15D3.3 | SMap | S_parent | Sequence | F15D3 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 149 | |||
| 631 | 1120 | |||||
| DB_info | DB_remark | coding pseudogene col-66 | ||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Type | Coding_pseudogene | |||||
| Visible | Gene | WBGene00000642 | ||||
| Brief_identification | Curated pseudogene | |||||
| Corresponding_PCR_product | mv_F15D3.3 | |||||
| Corresponding_oligo_set | 172198_x_at | |||||
| A_12_P115756 | ||||||
| Aff_F15D3.3 | ||||||
| GPL14144_F15D3.3_81-140_0.858_1_A | ||||||
| GPL19516_CGZ0016482 | ||||||
| GPL21109_F15D3.3 | ||||||
| GPL8304_CE_WBGene00000642_B | ||||||
| GPL8673_F15D3_3P00574 | ||||||
| Variation (28) | ||||||
| Microarray_results | 172198_x_at | |||||
| A_12_P115756 | ||||||
| A_12_P149610 | ||||||
| Aff_F15D3.3 | ||||||
| GPL14144_F15D3.3_81-140_0.858_1_A | ||||||
| GPL19516_CGZ0016482 | ||||||
| GPL21109_F15D3.3 | ||||||
| GPL8304_CE_WBGene00000642_B | ||||||
| GPL8673_F15D3_3P00574 | ||||||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 01 Oct 2012 00:00:00 | WBPerson1983 | ||||
| Remark | [070423 pad] Altered final exon in line with Transcript data, the previous final exon appears to correspond to a repetative area. | Accession_evidence | NDB | EC001134 | ||
| Curator_confirmed | WBPerson1983 | |||||
| [080118 pad] reversed the decision made previously. This is a collagen family member. The support for the gene is relatively low but this portion of the original gene refers to the collagen like region so naming should reside with this portion. The 5' end will be made into a new gene. | Curator_confirmed | WBPerson1983 | ||||
| [121001 pad] Retired as a coding loci in favor of a Pseudogenic loci. | Curator_confirmed | WBPerson1983 | ||||
| Method | Pseudogene |
