WormBase Tree Display for Gene: WBGene00000506

WBGene00000506 Evidence: Author_evidence: Bourbon H-M
  SMap: S_parent: Sequence: H14E04
  Identity: Version: 1
    Name: CGC_name: cic-1
      Sequence_name: H14E04.5
      Molecular_name: H14E04.5
        H14E04.5.1
        CE34571
      Other_name: CELE_H14E04.5 Accession_evidence: NDB BX284603
      Public_name: cic-1
    DB_info: Database: AceView gene 3D484
        WormQTL gene WBGene00000506
        WormFlux gene WBGene00000506
        NDB locus_tag CELE_H14E04.5
        Panther gene CAEEL|WormBase=WBGene00000506|UniProtKB=Q9TYP2
          family PTHR10026
        NCBI gene 175357
        RefSeq protein NM_065147.7
        SwissProt UniProtAcc Q9TYP2
        TREEFAM TREEFAM_ID TF101003
        UniProt_GCRP UniProtAcc Q9TYP2
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cic
    Allele: WBVar00391861
      WBVar01999158
      WBVar00391862
      WBVar00391863
      WBVar00391864
      WBVar01701648
      WBVar01827274
      WBVar00391865
      WBVar01827275
      WBVar01827276
      WBVar01827277
      WBVar01540893
      WBVar01540894
      WBVar01407880
      WBVar01962143
      WBVar01407881
      WBVar02086566
      WBVar01540895
      WBVar01540896
      WBVar01962144
      WBVar02085279
      WBVar01500082
      WBVar01540897
      WBVar01401368
      WBVar02114358
      WBVar02015019
      WBVar02015020
      WBVar02049677
      WBVar02015021
      WBVar02101480
      WBVar01771019
      WBVar01771020
      WBVar01722169
      WBVar00561501
      WBVar01692268
      WBVar01722170
      WBVar01898685
      WBVar01327636
      WBVar01327637
      WBVar01327641
      WBVar01327643
      WBVar02077728
      WBVar01327644
      WBVar01327645
      WBVar01327646
      WBVar01327651
      WBVar01396139
      WBVar01396140
      WBVar01479318
      WBVar01396141
      WBVar01396142
      WBVar02068604
      WBVar01396144
      WBVar01989739
      WBVar01896311
      WBVar01896312
      WBVar01498832
      WBVar01896313
      WBVar00264676
      WBVar01565642
      WBVar01565643
      WBVar01578654
      WBVar01578655
      WBVar00047728
      WBVar00047733
      WBVar00252348
      WBVar00047738
      WBVar00047743
      WBVar00047748
      WBVar00028801
      WBVar00320017
      WBVar01606920
      WBVar00047753
      WBVar01606921
      WBVar00028806
      WBVar00047758
      WBVar01415627
      WBVar01415628
      WBVar01415629
      WBVar01415630
      WBVar00047763
      WBVar00028816
      WBVar00047768
      WBVar00028821
      WBVar00047773
      WBVar02074060
      WBVar00047778
      WBVar00047783
      WBVar00047788
      WBVar02045665
      WBVar00047793
      WBVar01983820
      WBVar02018681
      WBVar01983821
      WBVar02096784
      WBVar00809359
      WBVar00809360
      WBVar00809361
      WBVar00235901
      WBVar00809362
      WBVar01686654
      WBVar00809363
      WBVar01686655
      WBVar00809364
      WBVar00809365
      WBVar00809366
      WBVar00809367
      WBVar02012872
      WBVar00809368
      WBVar00809369
      WBVar00809370
      WBVar00809371
      WBVar00233335
      WBVar01444348
      WBVar00233336
      WBVar00809372
      WBVar01444349
      WBVar00809373
      WBVar00809374
      WBVar00809375
      WBVar00809376
      WBVar00809377
      WBVar01259494
      WBVar00809378
      WBVar01259495
      WBVar02149955
      WBVar01259497
      WBVar02149956
      WBVar01259498
      WBVar01259500
      WBVar01938013
      WBVar01951736
      WBVar01259501
      WBVar00318158
      WBVar01951737
      WBVar01938014
      WBVar01259504
      WBVar01951738
      WBVar01938016
      WBVar02113566
      WBVar01259505
      WBVar02053154
      WBVar01259506
      WBVar01938017
      WBVar01259508
      WBVar01259509
      WBVar01259510
      WBVar01259511
      WBVar01259512
      WBVar01259513
      WBVar01259514
      WBVar02102351
      WBVar00297198
      WBVar00297199
      WBVar01655676
      WBVar01339604
      WBVar02112487
      WBVar00321852
      WBVar01548526
    RNASeq_FPKM (74)
    GO_annotation: 00097504
      00097505
      00097506
      00097507
      00097508
      00097509
      00107501
      00107502
    Ortholog (34)
    Paralog: WBGene00000507 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000876 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000508 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021714 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009650 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Expressed in neurons. Is an ortholog of human CCNC (cyclin C). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H14E04.5
    Corresponding_CDS_history: H14E04.5:wp102
    Corresponding_transcript: H14E04.5.1
    Other_sequence (28)
    Associated_feature: WBsf650875
      WBsf1014403
      WBsf226272
  Experimental_info: RNAi_result: WBRNAi00016270 Inferred_automatically: RNAi_primary
      WBRNAi00112417 Inferred_automatically: RNAi_primary
      WBRNAi00112426 Inferred_automatically: RNAi_primary
      WBRNAi00006789 Inferred_automatically: RNAi_primary
      WBRNAi00033714 Inferred_automatically: RNAi_primary
      WBRNAi00087248 Inferred_automatically: RNAi_primary
      WBRNAi00110965 Inferred_automatically: RNAi_primary
      WBRNAi00085253 Inferred_automatically: RNAi_primary
      WBRNAi00049406 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10768
      Expr1023182
      Expr1030299
      Expr1153141
      Expr2010009
      Expr2028250
    Drives_construct: WBCnstr00017722
    Microarray_results (18)
    Expression_cluster (80)
    Interaction (46)
  Map_info: Map: III Position: -14.6546 Error: 0.013697
    Positive: Positive_clone: H14E04 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene