WormBase Tree Display for Gene: WBGene00009650
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| WBGene00009650 | SMap | S_parent | Sequence | F43D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ccnk-1 | Person_evidence | WBPerson14421 | |||||
| WBPerson313 | |||||||||
| Sequence_name | F43D2.1 | ||||||||
| Molecular_name | F43D2.1 | ||||||||
| F43D2.1.1 | |||||||||
| CE38186 | |||||||||
| Other_name | CELE_F43D2.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ccnk-1 | ||||||||
| DB_info | Database | AceView | gene | 5P93 | |||||
| WormQTL | gene | WBGene00009650 | |||||||
| WormFlux | gene | WBGene00009650 | |||||||
| NDB | locus_tag | CELE_F43D2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009650|UniProtKB=O17869 | |||||||
| family | PTHR10026 | ||||||||
| NCBI | gene | 185704 | |||||||
| RefSeq | protein | NM_074214.5 | |||||||
| TREEFAM | TREEFAM_ID | TF101010 | |||||||
| TrEMBL | UniProtAcc | O17869 | |||||||
| UniProt_GCRP | UniProtAcc | O17869 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Nov 2012 16:16:49 | WBPerson2970 | Name_change | CGC_name | ccnk-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccnk | ||||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000506 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000507 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000508 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000876 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021714 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables cyclin-dependent protein serine/threonine kinase activator activity. Involved in nematode larval development. Located in nucleus. Is an ortholog of human CCNK (cyclin K). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43D2.1 | |||||||
| Corresponding_CDS_history | F43D2.1:wp140 | ||||||||
| Corresponding_transcript | F43D2.1.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf647544 | ||||||||
| WBsf1002076 | |||||||||
| WBsf1020885 | |||||||||
| WBsf232945 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1018618 | ||||||||
| Expr1034213 | |||||||||
| Expr1151044 | |||||||||
| Expr2009763 | |||||||||
| Expr2028003 | |||||||||
| Drives_construct | WBCnstr00032023 | ||||||||
| Construct_product | WBCnstr00019283 | ||||||||
| WBCnstr00019284 | |||||||||
| WBCnstr00032023 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (93) | |||||||||
| Map_info | Map | V | Position | 6.54907 | |||||
| Positive | Positive_clone | F43D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005736 | ||||||||
| WBPaper00027740 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00044000 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
