WormBase Tree Display for Gene: WBGene00000484
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| WBGene00000484 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F38G1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | che-2 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F38G1.1 | ||||||||
| Molecular_name | F38G1.1 | ||||||||
| F38G1.1.1 | |||||||||
| CE25876 | |||||||||
| Other_name | CELE_F38G1.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | che-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | che | ||||||||
| Reference_allele | WBVar00143695 | ||||||||
| Allele | WBVar00143695 | Inferred_automatically | From strain object: CB1033 | ||||||
| From strain object: DR170 | |||||||||
| From strain object: OS2723 | |||||||||
| From strain object: OS2728 | |||||||||
| WBVar00088591 | |||||||||
| WBVar00089126 | |||||||||
| WBVar00089152 | |||||||||
| WBVar00242501 | |||||||||
| WBVar01813618 | |||||||||
| WBVar01618087 | |||||||||
| WBVar01618088 | |||||||||
| WBVar01618089 | |||||||||
| WBVar01618090 | |||||||||
| WBVar01618091 | |||||||||
| WBVar01618092 | |||||||||
| WBVar01618093 | |||||||||
| WBVar01618094 | |||||||||
| WBVar01618095 | |||||||||
| WBVar01618096 | |||||||||
| WBVar01618097 | |||||||||
| WBVar01618098 | |||||||||
| WBVar01618099 | |||||||||
| WBVar01618100 | |||||||||
| WBVar01618101 | |||||||||
| WBVar01618102 | |||||||||
| WBVar01618103 | |||||||||
| WBVar01498638 | |||||||||
| WBVar01639563 | |||||||||
| WBVar01486154 | |||||||||
| WBVar01113124 | |||||||||
| WBVar01113125 | |||||||||
| WBVar01113126 | |||||||||
| WBVar01113127 | |||||||||
| WBVar02008963 | |||||||||
| WBVar01113128 | |||||||||
| WBVar02008964 | |||||||||
| WBVar01113129 | |||||||||
| WBVar01113130 | |||||||||
| WBVar00492403 | |||||||||
| WBVar01113131 | |||||||||
| WBVar01113132 | |||||||||
| WBVar00492404 | |||||||||
| WBVar01113133 | |||||||||
| WBVar00492405 | |||||||||
| WBVar01113134 | |||||||||
| WBVar00492406 | |||||||||
| WBVar02138573 | |||||||||
| WBVar00492407 | |||||||||
| WBVar01113135 | |||||||||
| WBVar01113136 | |||||||||
| WBVar00492408 | |||||||||
| WBVar00492409 | |||||||||
| WBVar01113137 | |||||||||
| WBVar01113138 | |||||||||
| WBVar00492410 | |||||||||
| WBVar01113139 | |||||||||
| WBVar00492411 | |||||||||
| WBVar00492412 | |||||||||
| WBVar01113140 | |||||||||
| WBVar01113141 | |||||||||
| WBVar00492413 | |||||||||
| WBVar00492414 | |||||||||
| WBVar01113142 | |||||||||
| WBVar00492415 | |||||||||
| WBVar01113143 | |||||||||
| WBVar01113144 | |||||||||
| WBVar00492416 | |||||||||
| WBVar01113145 | |||||||||
| WBVar01113146 | |||||||||
| WBVar01113147 | |||||||||
| WBVar01113148 | |||||||||
| WBVar00252189 | |||||||||
| WBVar01113149 | |||||||||
| WBVar01113150 | |||||||||
| WBVar01113151 | |||||||||
| WBVar01113152 | |||||||||
| WBVar01113153 | |||||||||
| WBVar01113154 | |||||||||
| WBVar01113155 | |||||||||
| WBVar01113156 | |||||||||
| WBVar01113157 | |||||||||
| WBVar01113158 | |||||||||
| WBVar01113159 | |||||||||
| WBVar01113160 | |||||||||
| WBVar01113161 | |||||||||
| WBVar01113162 | |||||||||
| WBVar01113163 | |||||||||
| WBVar01499636 | |||||||||
| WBVar01986884 | |||||||||
| WBVar01689973 | |||||||||
| WBVar00089146 | |||||||||
| WBVar01600305 | |||||||||
| WBVar00074304 | |||||||||
| WBVar00074305 | |||||||||
| WBVar01823932 | |||||||||
| WBVar01823933 | |||||||||
| Legacy_information | e1033 : non-chemotactic to sodium ion slightly small defective osmotic avoidance defective dauer formation males impotent; no FITC uptake; ciliated neurons have abnormal stunted ultrastructure. ES2 ME0. NA1. | ||||||||
| See also e1033 | |||||||||
| [C.elegansII] e1033 : non-chemotactic to sodium ion; slightly small; defective osmotic avoidance; defective dauer formation; males impotent; Dyf (no FITC uptake); ciliated neurons have abnormal stunted ultrastructure. ES2. ME0.OA5: m127, mn330mut, mn395 etc. [Lewis and Hodgkin 1977; Starich et al. 1995; DR; SP; NJ] | |||||||||
| Strain | WBStrain00030520 | ||||||||
| WBStrain00030521 | |||||||||
| WBStrain00004231 | |||||||||
| WBStrain00006208 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Concise_description | che-2 encodes a protein that contains G-protein beta-like WD-40 repeats that affects chemotaxis, dauer formation, and longevity; expressed in the cilia of most ciliated sensory neurons, some head neurons, and male tail rays. | Paper_evidence | WBPaper00001482 | |||||
| WBPaper00001786 | |||||||||
| WBPaper00002033 | |||||||||
| WBPaper00003761 | |||||||||
| WBPaper00003977 | |||||||||
| WBPaper00004692 | |||||||||
| WBPaper00005596 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in several processes, including dauer larval development; negative regulation of transforming growth factor beta receptor signaling pathway; and positive regulation of locomotion involved in locomotory behavior. Located in ciliary basal body and non-motile cilium. Expressed in neurons. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy 2. Is an ortholog of human IFT80 (intraflagellar transport 80). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110086 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29262) | ||||
| Molecular_info | Corresponding_CDS | F38G1.1 | |||||||
| Corresponding_transcript | F38G1.1.1 | ||||||||
| Other_sequence | Acan_isotig12713 | ||||||||
| JI226764.1 | |||||||||
| Associated_feature | WBsf042305 | ||||||||
| WBsf647785 | |||||||||
| WBsf1003791 | |||||||||
| WBsf235268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014580 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068042 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067404 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067940 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046733 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1157 | ||||||||
| Expr10123 | |||||||||
| Expr1024294 | |||||||||
| Expr1030285 | |||||||||
| Expr1150609 | |||||||||
| Expr2009965 | |||||||||
| Expr2028205 | |||||||||
| Drives_construct (17) | |||||||||
| Construct_product (11) | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (81) | |||||||||
| Map_info | Map | X | Position | -19.7593 | Error | 0.046333 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F38G1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 3385 | |||||||
| Multi_point | 1213 | ||||||||
| 1585 | |||||||||
| 1856 | |||||||||
| 2320 | |||||||||
| 2431 | |||||||||
| 2432 | |||||||||
| 4432 | |||||||||
| Pos_neg_data | 5455 | ||||||||
| 5461 | |||||||||
| 5466 | |||||||||
| 5470 | |||||||||
| 5474 | |||||||||
| 5478 | |||||||||
| 5482 | |||||||||
| 5486 | |||||||||
| 5490 | |||||||||
| 5494 | |||||||||
| Reference (127) | |||||||||
| Remark | Sequence connection from [Fujiwara M, Katsura I] | ||||||||
| Method | Gene |
