WormBase Tree Display for Sequence: F38G1
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| F38G1 | DNA | F38G1 | 24444 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00023034 | 19587 | 19658 | |
| WBGene00044556 | 8333 | 10087 | ||||
| WBGene00023035 | 21711 | 21640 | ||||
| WBGene00202078 | 19666 | 19587 | ||||
| WBGene00001185 | 21457 | 24090 | ||||
| WBGene00199679 | 20216 | 20067 | ||||
| WBGene00000484 | 13222 | 18276 | ||||
| CDS_child (89) | ||||||
| Transcript | F38G1.4 | 20216 | 20067 | |||
| F38G1.5 | 19666 | 19587 | ||||
| F38G1.t1 | 19587 | 19658 | ||||
| F38G1.t2 | 21711 | 21640 | ||||
| F38G1.1.1 | 13222 | 18276 | ||||
| F38G1.2.1 | 21457 | 24090 | ||||
| F38G1.2.2 | 21546 | 24050 | ||||
| F38G1.3.1 | 8333 | 10087 | ||||
| PCR_product | cenix:134-a12 | 22328 | 22724 | |||
| cenix:53-c10 | 16485 | 17132 | ||||
| mv_AAD00574 | 21567 | 23932 | ||||
| mv_CAB38019 | 13224 | 18203 | ||||
| sjj2_F38G1.2 | 23188 | 24182 | ||||
| sjj2_F38G1.3 | 8265 | 9763 | ||||
| sjj_F38G1.1 | 14540 | 15616 | ||||
| Allele (384) | ||||||
| Oligo_set | Aff_F38G1.1 | 16931 | 18173 | |||
| Feature_object (111) | ||||||
| Feature_data | F38G1:Polysome | 1 | 24444 | |||
| F38G1:TranscriptionallyActiveRegion | 1 | 24444 | ||||
| F38G1:ChIPSeqTF | 1 | 24444 | ||||
| F38G1:TRF | 1 | 24444 | ||||
| F38G1:Dust | 1 | 24444 | ||||
| F38G1:inverted | 1 | 24444 | ||||
| Homol_data (16) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | B0310 | 23745 | ||||
| Overlap_left | F52D1 | |||||
| Clone_left_end | F38G1 | 1 | ||||
| B0310 | 23745 | |||||
| Clone_right_end | F52D1 | 15490 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080171 | ||
| NDB_ID | _AC006635 | |||||
| NDB_SV | FO080171.2 | |||||
| Secondary_accession | AC006635 | |||||
| DB_remark | The 5' clone is F52D1, 200 bp overlap; the 3' clone is B0310, 700 bp overlap. Actual start of this clone is at base position 1 of F38G1; actual end is at 12693 of B0310. | |||||
| [121025] Sequence correction: SNP 0 bases @ 17872 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 20551 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 20576 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 23638 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Favello A | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 06 Oct 1995 00:00:00 | |||||
| 19 Oct 1995 00:00:00 | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F38G1 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | d472d0eee7e03739233339b1642e8b0a | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 06 Oct 1995 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -19.7714 | ||||
| Method | Genomic_canonical |
