WormBase Tree Display for Gene: WBGene00000288
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WBGene00000288 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cal | ||||||
Allele (139) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00015097 | ||||||
00107176 | |||||||
Ortholog (31) | |||||||
Paralog (18) | |||||||
Structured_description | Concise_description | cal-4 encodes one of five predicted C. elegans calcium-binding calmodulin homologs (the others being CAL-1, CAL-2, CAL-3 and CMD-1); as loss of cal-4 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of CAL-4 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00005654 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 18 Oct 2006 00:00:00 | ||||||
Automated_description | Predicted to enable calcium ion binding activity. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T07G12.1a | |||||
T07G12.1b | |||||||
T07G12.1c | |||||||
Corresponding_transcript | T07G12.1a.1 | ||||||
T07G12.1b.1 | |||||||
T07G12.1b.2 | |||||||
T07G12.1c.1 | |||||||
Other_sequence (28) | |||||||
Associated_feature | WBsf660585 | ||||||
WBsf660586 | |||||||
WBsf997639 | |||||||
WBsf997640 | |||||||
WBsf997641 | |||||||
WBsf997642 | |||||||
WBsf1018106 | |||||||
WBsf1018107 | |||||||
WBsf228999 | |||||||
Experimental_info | RNAi_result | WBRNAi00052782 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035317 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076661 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018388 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (5) | |||||||
Drives_construct | WBCnstr00004019 | ||||||
WBCnstr00037602 | |||||||
Construct_product | WBCnstr00037602 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (187) | |||||||
Interaction (11) | |||||||
Map_info | Map | IV | Position | 4.61636 | Error | 0.000867 | |
Positive | Positive_clone | T07G12 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00019540 | ||||||
WBPaper00023932 | |||||||
WBPaper00030971 | |||||||
WBPaper00050050 | |||||||
Remark | Sequence connection from [Schulze E, Karabinos A, Weber K], 02/06/11 krb | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |