WormBase Tree Display for Gene: WBGene00000179
expand all nodes | collapse all nodes | view schema
WBGene00000179 | Evidence | Person_evidence | WBPerson548 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK525 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | aqp-11 | Person_evidence | WBPerson300 | |||||
Sequence_name | ZK525.2 | ||||||||
Molecular_name | ZK525.2 | ||||||||
ZK525.2.1 | |||||||||
CE33909 | |||||||||
Other_name | CELE_ZK525.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | aqp-11 | ||||||||
DB_info | Database | AceView | gene | 3O765 | |||||
WormQTL | gene | WBGene00000179 | |||||||
WormFlux | gene | WBGene00000179 | |||||||
NDB | locus_tag | CELE_ZK525.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000179|UniProtKB=O46024 | |||||||
family | PTHR21191 | ||||||||
NCBI | gene | 191343 | |||||||
RefSeq | protein | NM_067420.7 | |||||||
TREEFAM | TREEFAM_ID | TF320251 | |||||||
TrEMBL | UniProtAcc | O46024 | |||||||
UniProt_GCRP | UniProtAcc | O46024 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | aqp | ||||||||
Allele (23) | |||||||||
Strain | WBStrain00033245 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00035829 | ||||||||
00035830 | |||||||||
00035831 | |||||||||
00035832 | |||||||||
00035833 | |||||||||
00035834 | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00000177 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000178 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | aqp-11 encodes a putative aquaporin with no function in mass RNAi assays, perhaps reflecting genetic redundancy with its paralogs AQP-9 and AQP-10; AQP-11 is orthologous to Drosophila CG12251 and human AQP11 (OMIM:609914), AQP12A (OMIM:609789), and AQP12B. | Paper_evidence | WBPaper00029039 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 12 Aug 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable channel activity. Predicted to be involved in transmembrane transport. Predicted to be located in cytoplasm. Is an ortholog of human AQP11 (aquaporin 11); AQP12A (aquaporin 12A); and AQP12B (aquaporin 12B). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00022047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006366 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059496 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038327 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028951 | ||||||||
Expr1030103 | |||||||||
Expr1162911 | |||||||||
Expr2009377 | |||||||||
Expr2027613 | |||||||||
Drives_construct | WBCnstr00037683 | ||||||||
Construct_product | WBCnstr00037683 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (142) | |||||||||
Interaction (49) | |||||||||
Map_info | Map | III | Position | 21.3482 | Error | 0.003133 | |||
Positive | Positive_clone | ZK525 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00010068 | ||||||||
WBPaper00019560 | |||||||||
WBPaper00027012 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |