WormBase Tree Display for Gene: WBGene00000178
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| WBGene00000178 | Evidence | Person_evidence | WBPerson548 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK1321 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | aqp-10 | Person_evidence | WBPerson300 | |||||
| Sequence_name | ZK1321.3 | ||||||||
| Molecular_name | ZK1321.3 | ||||||||
| ZK1321.3.1 | |||||||||
| CE01710 | |||||||||
| Other_name | CELE_ZK1321.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | aqp-10 | ||||||||
| DB_info | Database | AceView | gene | 2K58 | |||||
| WormQTL | gene | WBGene00000178 | |||||||
| WormFlux | gene | WBGene00000178 | |||||||
| NDB | locus_tag | CELE_ZK1321.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000178|UniProtKB=Q09369 | |||||||
| family | PTHR21191 | ||||||||
| NCBI | gene | 174537 | |||||||
| RefSeq | protein | NM_063704.7 | |||||||
| SwissProt | UniProtAcc | Q09369 | |||||||
| TREEFAM | TREEFAM_ID | TF320251 | |||||||
| UniProt_GCRP | UniProtAcc | Q09369 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aqp | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00053538 | ||||||||
| 00053539 | |||||||||
| 00053540 | |||||||||
| 00053541 | |||||||||
| 00053542 | |||||||||
| 00053543 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00000177 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000179 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | aqp-10 encodes an aquaporin paralogous to AQP-9 and AQP-11; infection with Pseudomonas aeruginosa induces AQP-10 to be intestinally expressed; AQP-10 is orthologous to Drosophila CG12251 and human AQP11(OMIM:609914), AQP12A(OMIM:609789), and AQP12B. | Paper_evidence | WBPaper00028482 | |||||
| WBPaper00029039 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 25 Mar 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable channel activity. Involved in innate immune response. Predicted to be located in cytoplasm. Is an ortholog of human AQP11 (aquaporin 11); AQP12A (aquaporin 12A); and AQP12B (aquaporin 12B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1321.3 | |||||||
| Corresponding_transcript | ZK1321.3.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf655384 | ||||||||
| WBsf989140 | |||||||||
| WBsf989141 | |||||||||
| WBsf1012898 | |||||||||
| WBsf1012899 | |||||||||
| WBsf223704 | |||||||||
| WBsf223705 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033534 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059243 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021889 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028949 | ||||||||
| Expr1030102 | |||||||||
| Expr1162672 | |||||||||
| Expr2009376 | |||||||||
| Expr2027612 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | II | Position | 1.71264 | Error | 0.000554 | |||
| Positive | Positive_clone | ZK1321 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5522 | |||||||
| 4543 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00019560 | ||||||||
| WBPaper00028482 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
