WormBase Tree Display for Gene: WBGene00000097
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| WBGene00000097 | SMap | S_parent | Sequence | F58E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | aip-1 | Person_evidence | WBPerson530 | |||||
| Sequence_name | F58E10.4 | ||||||||
| Molecular_name | F58E10.4 | ||||||||
| F58E10.4.1 | |||||||||
| CE18786 | |||||||||
| Other_name | CELE_F58E10.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | aip-1 | ||||||||
| DB_info | Database | AceView | gene | 5O493 | |||||
| WormQTL | gene | WBGene00000097 | |||||||
| WormFlux | gene | WBGene00000097 | |||||||
| NDB | locus_tag | CELE_F58E10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000097|UniProtKB=Q9XUW8 | |||||||
| family | PTHR14677 | ||||||||
| NCBI | gene | 179898 | |||||||
| RefSeq | protein | NM_074078.4 | |||||||
| TREEFAM | TREEFAM_ID | TF314219 | |||||||
| TrEMBL | UniProtAcc | Q9XUW8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUW8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aip | ||||||||
| Allele (11) | |||||||||
| Strain | WBStrain00035638 | ||||||||
| WBStrain00036456 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102182 | ||||||||
| 00102183 | |||||||||
| 00102184 | |||||||||
| 00102185 | |||||||||
| 00102186 | |||||||||
| 00102187 | |||||||||
| 00102188 | |||||||||
| 00102189 | |||||||||
| 00102190 | |||||||||
| 00106777 | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Concise_description | aip-1 encodes an AN-1-like zinc finger-containing protein homologous to arsenite-inducible RNA-associated protein (AIRAP), conserved among C. elegans, Drosophila, and mammals; like AIRAP itself, AIP-1 protects cells from arsenite toxicity; AIP-1 is a predicted RNA binding protein that may function in ubiquitin-mediated proteolysis following arsenite treatment; AIP-1 does not appear to be essential for viability, but is expressed at high levels in hypodermal and intestinal cells following such treatment. | Paper_evidence | WBPaper00004641 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable zinc ion binding activity. Involved in cellular response to misfolded protein and response to arsenic-containing substance. Located in cytoplasm and nucleus. Expressed in body wall musculature; excretory cell; pharynx; and somatic gonad. Is an ortholog of human ZFAND2A (zinc finger AN1-type containing 2A) and ZFAND2B (zinc finger AN1-type containing 2B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Modifies_disease | DOID:10652 | ||||||||
| Modifies_disease_in_annotation | WBDOannot00000387 | ||||||||
| Molecular_info | Corresponding_CDS | F58E10.4 | |||||||
| Corresponding_transcript | F58E10.4.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf216751 | ||||||||
| WBsf216752 | |||||||||
| WBsf647506 | |||||||||
| WBsf661074 | |||||||||
| WBsf982036 | |||||||||
| WBsf1001915 | |||||||||
| WBsf232857 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr885 | ||||||||
| Expr12709 | |||||||||
| Expr1023652 | |||||||||
| Expr1030047 | |||||||||
| Expr1152736 | |||||||||
| Expr2009274 | |||||||||
| Expr2027511 | |||||||||
| Drives_construct | WBCnstr00005154 | ||||||||
| WBCnstr00005155 | |||||||||
| WBCnstr00005156 | |||||||||
| WBCnstr00018309 | |||||||||
| WBCnstr00018310 | |||||||||
| WBCnstr00037736 | |||||||||
| Construct_product | WBCnstr00037736 | ||||||||
| Antibody | WBAntibody00000360 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (31) | |||||||||
| WBProcess | WBbiopr:00000078 | ||||||||
| Map_info | Map | V | Position | 5.91965 | Error | 0.0241 | |||
| Positive | Positive_clone | F58E10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4149 | |||||||
| 4287 | |||||||||
| 4288 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence connection from [Sok J, Ron D] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
