WormBase Tree Display for Gene: WBGene00000034
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| WBGene00000034 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | abu-11 | Person_evidence | WBPerson530 | |||||
| Sequence_name | T01D1.6 | ||||||||
| Molecular_name | T01D1.6 | ||||||||
| T01D1.6.1 | |||||||||
| CE28071 | |||||||||
| Other_name | pqn-61 | CGC_data_submission | |||||||
| CELE_T01D1.6 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | abu-11 | ||||||||
| DB_info | Database | AceView | gene | 2A484 | |||||
| WormQTL | gene | WBGene00000034 | |||||||
| WormFlux | gene | WBGene00000034 | |||||||
| NDB | locus_tag | CELE_T01D1.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000034|UniProtKB=P91419 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 173404 | |||||||
| RefSeq | protein | NM_061278.6 | |||||||
| TREEFAM | TREEFAM_ID | TF344232 | |||||||
| TrEMBL | UniProtAcc | P91419 | |||||||
| UniProt_GCRP | UniProtAcc | P91419 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abu | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050951 | ||||||||
| 00050952 | |||||||||
| 00050953 | |||||||||
| Ortholog (23) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Concise_description | abu-11 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-11 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-11 may help protect the organism from damage by improperly folded nascent protein. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00005432 | |||||||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00013108 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in endoplasmic reticulum unfolded protein response. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01D1.6 | |||||||
| Corresponding_transcript | T01D1.6.1 | ||||||||
| Other_sequence | CRC00569_1 | ||||||||
| BG468048.1 | |||||||||
| NAC00678_1 | |||||||||
| CJC07046_1 | |||||||||
| Associated_feature | WBsf649810 | ||||||||
| WBsf986345 | |||||||||
| WBsf1011354 | |||||||||
| WBsf222573 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr12493 | ||||||||
| Expr1019415 | |||||||||
| Expr1030014 | |||||||||
| Expr1155751 | |||||||||
| Expr2009104 | |||||||||
| Expr2027340 | |||||||||
| Drives_construct | WBCnstr00006346 | ||||||||
| WBCnstr00021463 | |||||||||
| WBCnstr00037780 | |||||||||
| WBCnstr00040353 | |||||||||
| Construct_product | WBCnstr00006346 | ||||||||
| WBCnstr00037780 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (218) | |||||||||
| Interaction (129) | |||||||||
| WBProcess | WBbiopr:00000008 | ||||||||
| WBbiopr:00000046 | |||||||||
| WBbiopr:00000079 | |||||||||
| Map_info | Map | II | Position | -15.8666 | Error | 0.014874 | |||
| Positive | Positive_clone | T01D1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026601 | ||||||||
| WBPaper00026929 | |||||||||
| WBPaper00032003 | |||||||||
| WBPaper00040821 | |||||||||
| WBPaper00045960 | |||||||||
| WBPaper00051669 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
