WormBase Tree Display for Sequence: T28B8
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T28B8 | DNA | T28B8 | 33970 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00167759 | 7923 | 7903 | |
WBGene00012114 | 20897 | 28833 | ||||
WBGene00202025 | 29639 | 29562 | ||||
WBGene00201164 | 29562 | 29639 | ||||
WBGene00171280 | 6311 | 6291 | ||||
WBGene00002101 | 16462 | 18686 | ||||
WBGene00220106 | 4875 | 4990 | ||||
WBGene00012113 | 3150 | 4086 | ||||
WBGene00044122 | 19390 | 20406 | ||||
WBGene00012116 | 11572 | 8503 | ||||
CDS_child (121) | ||||||
Transcript (11) | ||||||
Genomic_non_canonical | WRM0627bC02 | 1073 | 32357 | |||
PCR_product (14) | ||||||
Allele (339) | ||||||
Oligo_set | Aff_T28B8.1 | 3179 | 3770 | |||
Aff_T28B8.2 | 17961 | 18620 | ||||
Aff_T28B8.3 | 27942 | 28767 | ||||
Aff_T28B8.5 | 9423 | 8540 | ||||
Feature_object | WBsf984351 | 2720 | 2870 | |||
WBsf984352 | 5140 | 5290 | ||||
WBsf984353 | 6240 | 6390 | ||||
WBsf984354 | 7600 | 7750 | ||||
WBsf984355 | 8400 | 8508 | ||||
WBsf984356 | 16360 | 16467 | ||||
WBsf984357 | 17300 | 17450 | ||||
WBsf984358 | 28800 | 28950 | ||||
WBsf1010189 | 2720 | 2870 | ||||
WBsf1010190 | 6240 | 6390 | ||||
WBsf1010191 | 7600 | 7750 | ||||
WBsf1010192 | 8420 | 8508 | ||||
WBsf1010193 | 17280 | 17430 | ||||
WBsf1010194 | 28800 | 28950 | ||||
WBsf002840 | 11573 | 11572 | ||||
WBsf008485 | 3149 | 3150 | ||||
WBsf015318 | 16461 | 16462 | ||||
WBsf018683 | 18666 | 18671 | ||||
WBsf018684 | 18686 | 18687 | ||||
WBsf023069 | 26884 | 26885 | ||||
WBsf048457 | 4088 | 4088 | ||||
WBsf050050 | 9068 | 9068 | ||||
WBsf052288 | 29918 | 29918 | ||||
WBsf053105 | 20410 | 20410 | ||||
WBsf053850 | 4093 | 4093 | ||||
WBsf054423 | 21138 | 21138 | ||||
WBsf054424 | 24726 | 24726 | ||||
WBsf055097 | 4090 | 4090 | ||||
WBsf123922 | 3149 | 3150 | ||||
WBsf139194 | 9068 | 9068 | ||||
WBsf146498 | 4088 | 4089 | ||||
WBsf146841 | 4092 | 4093 | ||||
WBsf146943 | 18684 | 18685 | ||||
WBsf218124 | 3771 | 3808 | ||||
WBsf218125 | 3771 | 4013 | ||||
WBsf218126 | 3771 | 4083 | ||||
WBsf218127 | 18621 | 18685 | ||||
WBsf218128 | 20353 | 20406 | ||||
WBsf219872 | 8539 | 8498 | ||||
WBsf239704 | 4086 | 4087 | ||||
WBsf239705 | 18782 | 18783 | ||||
WBsf241219 | 8497 | 8496 | ||||
WBsf241659 | 20408 | 20409 | ||||
WBsf268788 | 18755 | 18756 | ||||
WBsf270001 | 4095 | 4096 | ||||
WBsf270388 | 28697 | 28698 | ||||
WBsf602314 | 18747 | 18748 | ||||
WBsf602354 | 4098 | 4099 | ||||
WBsf602375 | 3966 | 3967 | ||||
WBsf603096 | 18720 | 18721 | ||||
WBsf603573 | 3835 | 3836 | ||||
WBsf603703 | 26046 | 26047 | ||||
WBsf606869 | 20095 | 20094 | ||||
WBsf607654 | 3935 | 3936 | ||||
WBsf607890 | 20132 | 20131 | ||||
WBsf949936 | 3575 | 3576 | ||||
WBsf949937 | 4556 | 4557 | ||||
WBsf949938 | 4556 | 4557 | ||||
WBsf949939 | 4565 | 4566 | ||||
WBsf949940 | 8752 | 8753 | ||||
WBsf949941 | 8812 | 8813 | ||||
WBsf949942 | 9931 | 9930 | ||||
WBsf949943 | 14551 | 14552 | ||||
WBsf949944 | 17952 | 17953 | ||||
WBsf949945 | 18516 | 18517 | ||||
WBsf949946 | 24215 | 24216 | ||||
WBsf979757 | 20403 | 20404 | ||||
WBsf216818 | 2651 | 3044 | ||||
WBsf977613 | 2486 | 3393 | ||||
WBsf280420 | 2535 | 3396 | ||||
WBsf280609 | 3845 | 4478 | ||||
WBsf280808 | 2513 | 3213 | ||||
WBsf282044 | 4695 | 4960 | ||||
WBsf282481 | 4003 | 4412 | ||||
WBsf284269 | 2258 | 5610 | ||||
WBsf285010 | 2335 | 3585 | ||||
WBsf286035 | 4312 | 5468 | ||||
WBsf286065 | 4063 | 4099 | ||||
WBsf286813 | 3865 | 5123 | ||||
WBsf286815 | 2632 | 3490 | ||||
WBsf287768 | 2572 | 3728 | ||||
WBsf288232 | 2675 | 3132 | ||||
WBsf288597 | 4616 | 5003 | ||||
WBsf288955 | 2650 | 3293 | ||||
WBsf289384 | 2799 | 2942 | ||||
WBsf290209 | 4006 | 4247 | ||||
WBsf290326 | 5274 | 5282 | ||||
WBsf290596 | 2607 | 3236 | ||||
WBsf290744 | 4477 | 5179 | ||||
WBsf291915 | 3857 | 4166 | ||||
WBsf292895 | 6786 | 6810 | ||||
WBsf293134 | 28731 | 28744 | ||||
WBsf293135 | 12314 | 12432 | ||||
WBsf293545 | 2538 | 5001 | ||||
WBsf295009 | 2582 | 3719 | ||||
WBsf295588 | 2540 | 3262 | ||||
WBsf295822 | 4508 | 5208 | ||||
WBsf296065 | 4019 | 4288 | ||||
WBsf296190 | 2601 | 3713 | ||||
WBsf296378 | 4225 | 5281 | ||||
WBsf296822 | 2601 | 3713 | ||||
WBsf297010 | 4225 | 5281 | ||||
WBsf298398 | 2674 | 3159 | ||||
WBsf298493 | 3803 | 4574 | ||||
WBsf298700 | 2591 | 3118 | ||||
WBsf299218 | 4012 | 4467 | ||||
WBsf299418 | 4705 | 5251 | ||||
WBsf299433 | 15632 | 15687 | ||||
WBsf299849 | 2605 | 3288 | ||||
WBsf300571 | 4638 | 5246 | ||||
WBsf301189 | 2524 | 3223 | ||||
WBsf301223 | 4090 | 5051 | ||||
WBsf301578 | 2552 | 3257 | ||||
WBsf301704 | 3954 | 5171 | ||||
WBsf302288 | 2613 | 3313 | ||||
WBsf305406 | 2619 | 3616 | ||||
WBsf305465 | 7725 | 7994 | ||||
WBsf305730 | 2640 | 3045 | ||||
WBsf306175 | 2555 | 5048 | ||||
WBsf306948 | 2495 | 3388 | ||||
WBsf307103 | 2487 | 5080 | ||||
WBsf309285 | 2576 | 3664 | ||||
WBsf309413 | 4471 | 5114 | ||||
WBsf310262 | 2587 | 3562 | ||||
WBsf312458 | 2384 | 5960 | ||||
WBsf313320 | 2236 | 5655 | ||||
WBsf316664 | 18940 | 19107 | ||||
WBsf316993 | 2418 | 5020 | ||||
WBsf319629 | 2589 | 5632 | ||||
WBsf321018 | 2337 | 5580 | ||||
WBsf321594 | 3947 | 4129 | ||||
WBsf321710 | 4204 | 4469 | ||||
WBsf322009 | 2349 | 3343 | ||||
WBsf322857 | 4486 | 5248 | ||||
WBsf323355 | 2351 | 5279 | ||||
WBsf324579 | 2591 | 3312 | ||||
WBsf325910 | 3857 | 5058 | ||||
WBsf325928 | 2506 | 3400 | ||||
WBsf326893 | 4120 | 5634 | ||||
WBsf326900 | 2589 | 3343 | ||||
WBsf327024 | 7538 | 7979 | ||||
WBsf327486 | 2167 | 5325 | ||||
WBsf327631 | 20576 | 20911 | ||||
WBsf327924 | 7495 | 7980 | ||||
WBsf328369 | 2612 | 3186 | ||||
WBsf328497 | 4607 | 5329 | ||||
WBsf328834 | 7533 | 7969 | ||||
WBsf329859 | 2625 | 6477 | ||||
WBsf331339 | 2201 | 6001 | ||||
WBsf332513 | 20547 | 20902 | ||||
WBsf332712 | 2156 | 3478 | ||||
WBsf332788 | 26095 | 26360 | ||||
WBsf335042 | 4986 | 5168 | ||||
WBsf335076 | 2693 | 3051 | ||||
WBsf335293 | 2411 | 3440 | ||||
WBsf336041 | 2724 | 3041 | ||||
WBsf336417 | 2636 | 3100 | ||||
WBsf337292 | 3744 | 5065 | ||||
WBsf337527 | 2603 | 3349 | ||||
WBsf339361 | 2697 | 3047 | ||||
WBsf339542 | 2622 | 3080 | ||||
WBsf339940 | 4796 | 5110 | ||||
WBsf339968 | 4080 | 4136 | ||||
WBsf340390 | 4034 | 4256 | ||||
WBsf340399 | 2678 | 3011 | ||||
WBsf340588 | 2168 | 5714 | ||||
WBsf340766 | 18803 | 19186 | ||||
WBsf981058 | 2291 | 4123 | ||||
WBsf045393 | 1710 | 3343 | ||||
WBsf268343 | 30421 | 30421 | ||||
WBsf643512 | 2883 | 3021 | ||||
WBsf643513 | 3136 | 3149 | ||||
WBsf643514 | 3239 | 3253 | ||||
WBsf643515 | 16524 | 16534 | ||||
WBsf656609 | 3292 | 3331 | ||||
WBsf656610 | 3710 | 3743 | ||||
WBsf664516 | 10462 | 10451 | ||||
WBsf673432 | 4684 | 4684 | ||||
WBsf673433 | 4867 | 4993 | ||||
WBsf673434 | 5170 | 5293 | ||||
WBsf673435 | 6289 | 6553 | ||||
WBsf673436 | 7763 | 7782 | ||||
WBsf673437 | 7861 | 8023 | ||||
WBsf695110 | 2809 | 2572 | ||||
WBsf695111 | 4664 | 4650 | ||||
WBsf695112 | 4814 | 4791 | ||||
WBsf695113 | 4950 | 4852 | ||||
WBsf695114 | 6111 | 6111 | ||||
WBsf695115 | 7784 | 7556 | ||||
WBsf695116 | 8419 | 8411 | ||||
WBsf695117 | 16314 | 16274 | ||||
WBsf715742 | 6264 | 6168 | ||||
WBsf260941 | 14638 | 14769 | ||||
WBsf260942 | 33606 | 33658 | ||||
WBsf266964 | 18907 | 19040 | ||||
Feature_data | T28B8:Polysome | 1 | 33970 | |||
T28B8:TranscriptionallyActiveRegion | 1 | 33970 | ||||
T28B8:ChIPSeqTF | 1 | 33970 | ||||
T28B8:TRF | 1 | 33970 | ||||
T28B8:Dust | 1 | 33970 | ||||
T28B8:inverted | 1 | 33970 | ||||
Homol_data (17) | ||||||
Structure | From | Source | CHROMOSOME_I | |||
Overlap_right | H31B20 | 33861 | ||||
Overlap_left | C09H6 | |||||
Clone_left_end | T28B8 | 1 | ||||
Clone_right_end | T28B8 | 33970 | ||||
DB_info | Database | EMBL | NDB_AC | Z81133 | ||
NDB_SV | Z81133.2 | |||||
DB_remark | [971121 dl] Cosmid fliped based on sequence overlap with C09H6 | |||||
[121025] Sequence correction WBsf268343 : Insertion G1 bases from @ 30420 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | White S | ||||
From_laboratory | HX | |||||
Date_directory | 971120 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | T28B8 | ||||
Reference | WBPaper00015325 | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | c82da3f7c0a5cb30e911f9ce7dcfab25 | ||||
Status | Finished | 20 Nov 1997 00:00:00 | ||||
Submitted | 21 Oct 1996 00:00:00 | |||||
Annotated | 21 Nov 1997 00:00:00 | |||||
Map | Sequence-I | Ends | Left | 3852 | ||
Right | 3876 | |||||
Interpolated_map_position | I | 2.59933 | ||||
Assembly_tags | Clone left end | 1 | 4 | T28B8 | ||
Finished Left | 1 | 4 | T28B8 | |||
annotation | 29634 | 29567 | 34 AT's | |||
comment | 11453 | 11465 | ?do long term | |||
32238 | 32243 | ?Diverges again | ||||
repeat | 29634 | 29605 | ||||
Clone right end | 33970 | 33967 | T28B8 | |||
Finished Right | 33970 | 33967 | ||||
Method | Genomic_canonical |