WormBase Tree Display for CDS: T27F6.8
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| T27F6.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T27F6 | |||
| Structure | Source_exons | 1 | 439 | |||
| 493 | 877 | |||||
| 1696 | 1777 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O45872 | ||
| UniProt | UniProtAcc | O45872 | ||||
| UniProt_GCRP | UniProtAcc | O45872 | ||||
| AlphaFold | entry | O45872 | ||||
| NCBI_protein | GI_number | GI:3880332 | ||||
| TREEFAM | TREEFAM_ID | TF317348 | ||||
| Protein_id | CHROMOSOME_I | CAB04887 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00646 (F-box domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00012107 | ||||
| Corresponding_transcript | T27F6.8.1 | |||||
| Corresponding_protein | CE16517 | |||||
| Corresponding_PCR_product | cenix:90-h1 | |||||
| mv_T27F6.8 | ||||||
| sjj_T27F6.8 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_15055 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_13140 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_44638 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_14122 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_15826 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_25926 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_13877 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF062G11_1 | Inferred_automatically | transcript_builder.pl | ||||
| FN896234 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_55239 | Inferred_automatically | transcript_builder.pl | ||||
| yk1562d09.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_188101 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_208537 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_54173 | Inferred_automatically | transcript_builder.pl | ||||
| FN904372 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_65668 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_38377 | Inferred_automatically | transcript_builder.pl | ||||
| FN875234 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_213210 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_32767 | Inferred_automatically | transcript_builder.pl | ||||
| FN875910 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG2072|c1_g2_i1 | Inferred_automatically | transcript_builder.pl | ||||
| FN871271 | Inferred_automatically | transcript_builder.pl | ||||
| CN797616 | Inferred_automatically | transcript_builder.pl | ||||
| FN875911 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_31986 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00036051 | |||||
| WBRNAi00004332 | ||||||
| WBRNAi00054345 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:O45872 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf122627 | |||||
| Method | curated |
