WormBase Tree Display for Gene: WBGene00012107
expand all nodes | collapse all nodes | view schema
| WBGene00012107 | SMap | S_parent | Sequence | T27F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T27F6.8 | |||||||
| Molecular_name | T27F6.8 | ||||||||
| T27F6.8.1 | |||||||||
| CE16517 | |||||||||
| Other_name | CELE_T27F6.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T27F6.8 | ||||||||
| DB_info | Database | AceView | gene | 1N88 | |||||
| WormQTL | gene | WBGene00012107 | |||||||
| WormFlux | gene | WBGene00012107 | |||||||
| NDB | locus_tag | CELE_T27F6.8 | |||||||
| NCBI | gene | 189005 | |||||||
| RefSeq | protein | NM_060770.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317348 | |||||||
| TrEMBL | UniProtAcc | O45872 | |||||||
| UniProt_GCRP | UniProtAcc | O45872 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00009222 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00011263 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in germline precursor cell; hypodermis; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including rotenone; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27F6.8 | |||||||
| Corresponding_transcript | T27F6.8.1 | ||||||||
| Associated_feature | WBsf649664 | ||||||||
| WBsf665025 | |||||||||
| WBsf985577 | |||||||||
| WBsf985578 | |||||||||
| WBsf1010901 | |||||||||
| WBsf220432 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036051 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004332 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054345 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022102 | ||||||||
| Expr1035348 | |||||||||
| Expr1157891 | |||||||||
| Expr2006584 | |||||||||
| Expr2024800 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (197) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Positive | Positive_clone | T27F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.2408 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
