WormBase Tree Display for CDS: T12B5.4
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| T12B5.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T12B5 | |||
| Structure | Source_exons | 1 | 71 | |||
| 314 | 935 | |||||
| 980 | 1174 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9TZ23 | ||
| UniProt | UniProtAcc | Q9TZ23 | ||||
| UniProt_GCRP | UniProtAcc | Q9TZ23 | ||||
| AlphaFold | entry | Q9TZ23 | ||||
| NCBI_protein | GI_number | GI:351064772 | ||||
| TREEFAM | TREEFAM_ID | TF322006 | ||||
| Protein_id | CHROMOSOME_III | CCD73253 | 1 | |||
| DB_remark | FBXA-11 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020451 | ||||
| Corresponding_transcript | T12B5.4.1 | |||||
| Corresponding_protein | CE20062 | |||||
| Corresponding_PCR_product | TH:328B5 | |||||
| TH:338B10 | ||||||
| TH:339G1 | ||||||
| cenix:328-b5 | ||||||
| cenix:338-b10 | ||||||
| cenix:339-g1 | ||||||
| mv_T12B5.4 | ||||||
| sjj_T12B5.4 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (19) | ||||||
| RNAi_result | WBRNAi00007118 | |||||
| WBRNAi00053188 | ||||||
| WBRNAi00053186 | ||||||
| WBRNAi00007149 | ||||||
| WBRNAi00006598 | ||||||
| WBRNAi00018632 | ||||||
| WBRNAi00035505 | ||||||
| WBRNAi00053185 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:Q9TZ23 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf126836 | |||||
| Method | curated |
