WormBase Tree Display for CDS: T08G5.5d
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| T08G5.5d | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T08G5 | ||
| Structure | Source_exons | 1 | 73 | ||
| 121 | 186 | ||||
| 237 | 445 | ||||
| 494 | 636 | ||||
| 681 | 973 | ||||
| 1026 | 1394 | ||||
| 1448 | 1728 | ||||
| 1774 | 2305 | ||||
| 2353 | 2945 | ||||
| 3545 | 3757 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A486WXM5 | |
| UniProt | UniProtAcc | A0A486WXM5 | |||
| AlphaFold | entry | A0A486WXM5 | |||
| NCBI_protein | GI_number | GI:1615792117 | |||
| Protein_id | CHROMOSOME_V | VGM69591 | 1 | ||
| DB_remark | VPS-39 protein; contains similarity to Pfam domains PF00780 (CNH domain), PF10366 (Vacuolar sorting protein 39 domain 1), PF10367 (Vacuolar sorting protein 39 domain 2); contains similarity to Interpro domains IPR019452 (Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1), IPR019453 (Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2), IPR036322 (WD40-repeat-containing domain superfamily), IPR032914 (Vam6/VPS39/TRAP1 family), IPR001180 (Citron homology (CNH) domain), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Curator_confirmed | WBPerson4025 | |||
| Visible (12) | |||||
| Method | curated |
