WormBase Tree Display for CDS: T05A10.1d

T05A10.1d SMap: S_parent: Sequence: T05A10
  Structure: Source_exons (25)
  DB_info: Database: SwissProt UniProtAcc Q7JM44
        UniProtIsoformAcc Q7JM44-1
      UniProt UniProtAcc Q7JM44
      UniProt_GCRP UniProtAcc Q7JM44
      AlphaFold entry Q7JM44
    Protein_id: CHROMOSOME_X CAF31491 2
    DB_remark: SMA-9 protein; contains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type), PF12874 (Zinc-finger of C2H2 type); contains similarity to Interpro domains IPR003604 (Matrin/U1-C-like, C2H2-type zinc finger), IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
    Isoform: Paper_evidence: WBPaper00013343
  Visible: Gene: WBGene00004862
    Corresponding_transcript: T05A10.1d.1
    Corresponding_protein: CE53674
    Corresponding_PCR_product: cenix:141-d2
      mv_T05A10.1
      sjj_T05A10.1
    Corresponding_oligo_set (43)
    Matching_cDNA (11)
    RNAi_result (21)
    Microarray_results (65)
    Brief_identification: Transcription factor sma-9 Accession_evidence: UniProt SP:Q7JM44
    RNASeq_FPKM (74)
    Last_reviewed: 12 Jun 2019 15:04:44 WBPerson4025
    Remark: [alt] Alternate isoform defined by EST yk128a8
      [040204 pad] Gene prediction entered to represent data contained within Development 130, 6453-6464 (2003)) 3' Ia variant Paper_evidence: WBPaper00013343
        Curator_confirmed: WBPerson1983
      [040206 pad] This gene prediction uses the original gene finder prediction as a templeate where the Transcript data is abscent as the isoform is based on a partial mRNA. Curator_confirmed: WBPerson1983
      [190612 gw3] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4025
        From_analysis: RNASeq
  Method: curated