WormBase Tree Display for CDS: K09G1.1d
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| K09G1.1d | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K09G1 | |||
| Structure | Source_exons | 1 | 67 | |||
| 2558 | 2676 | |||||
| 5788 | 5910 | |||||
| 6078 | 6260 | |||||
| 6310 | 6423 | |||||
| 6492 | 6608 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | D9N146 | ||
| UniProt | UniProtAcc | D9N146 | ||||
| AlphaFold | entry | D9N146 | ||||
| NCBI_protein | GI_number | GI:299782130 | ||||
| Protein_id | CHROMOSOME_V | CBO25097 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01284 (Membrane-associating domain); contains similarity to Interpro domain IPR008253 (Marvel domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
| Visible | Gene | WBGene00010727 | ||||
| Corresponding_transcript | K09G1.1d.1 | |||||
| Corresponding_protein | CE45173 | |||||
| Corresponding_PCR_product | cenix:104-g8 | |||||
| mv_K09G1.1 | ||||||
| sjj2_K09G1.1a | ||||||
| sjj_K09G1.1 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA (30) | ||||||
| RNAi_result | WBRNAi00034219 | |||||
| WBRNAi00050453 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | MARVEL domain-containing protein | Accession_evidence | UniProt | TR:D9N146 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 21 Jun 2010 00:00:00 | WBPerson4025 | ||||
| Remark | [100621 gw3] Created this isoform based on the RNASeq data. | From_analysis | RNASeq_Hillier_elegans | |||
| Method | curated |
