WormBase Tree Display for CDS: K05F1.2
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| K05F1.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K05F1 | |||
| Structure | Source_exons | 1 | 384 | |||
| DB_info | Database | SwissProt | UniProtAcc | P53017 | ||
| UniProt | UniProtAcc | P53017 | ||||
| UniProt_GCRP | UniProtAcc | P53017 | ||||
| AlphaFold | entry | P53017 | ||||
| NCBI_protein | GI_number | GI:373219627 | ||||
| Protein_id | CHROMOSOME_II | CCD69142 | 1 | |||
| DB_remark | MSP-142 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003469 | ||||
| Corresponding_transcript | K05F1.2.1 | |||||
| Corresponding_protein | CE02806 | |||||
| Corresponding_PCR_product | cenix:206-e1 | |||||
| mv_K05F1.2 | ||||||
| sjj_K05F1.2 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | male_Nanopore_Roach_48863 | |||||
| male_Nanopore_Roach_53128 | ||||||
| male_Nanopore_Roach_111564 | ||||||
| male_Nanopore_Roach_157497 | ||||||
| young_adult_Nanopore_Roach_30554 | ||||||
| young_adult_Nanopore_Roach_54437 | ||||||
| young_adult_Nanopore_Roach_131151 | ||||||
| L4_Nanopore_Roach_67981 | ||||||
| adult_Nanopore_Roach_108466 | ||||||
| male_Nanopore_Roach_48430 | ||||||
| RNAi_result | WBRNAi00033989 | |||||
| WBRNAi00049989 | ||||||
| WBRNAi00059194 | ||||||
| WBRNAi00021849 | ||||||
| WBRNAi00059192 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 | Accession_evidence | UniProt | SP:P53017 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
