WormBase Tree Display for CDS: K04G2.8b
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K04G2.8b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K04G2 | |||
Structure | Source_exons | 1 | 183 | |||
388 | 542 | |||||
592 | 1318 | |||||
1811 | 2398 | |||||
2440 | 3993 | |||||
4658 | 4939 | |||||
5022 | 5099 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q21227 | ||
UniProtIsoformAcc | Q21227-1 | |||||
UniProt | UniProtAcc | Q21227 | ||||
UniProt_GCRP | UniProtAcc | Q21227 | ||||
AlphaFold | entry | Q21227 | ||||
NCBI_protein | GI_number | GI:3878270 | ||||
TREEFAM | TREEFAM_ID | TF106496 | ||||
Protein_id | CHROMOSOME_I | CAB00048 | 1 | |||
DB_remark | APR-1 protein; contains similarity to Interpro domains IPR026818 (Adenomatous polyposis coli (APC) family), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold) | |||||
Origin (2) | ||||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | C51786 | |||
Inferred_automatically | transcript_builder | |||||
Visible | Gene | WBGene00000156 | ||||
Corresponding_transcript | K04G2.8b.1 | |||||
Corresponding_protein | CE18016 | |||||
Corresponding_PCR_product | cenix:72-g4 | |||||
mv_AAC47747 | ||||||
mv_K04G2.8b | ||||||
sjj_K04G2.8 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (31) | ||||||
RNAi_result (104) | ||||||
Microarray_results (19) | ||||||
Brief_identification | Adenomatous polyposis coli protein-related protein 1 | Accession_evidence | UniProt | SP:Q21227 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf122860 | |||||
Method | curated |