WormBase Tree Display for CDS: K02B9.4c

K02B9.4c Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: K02B9
  Structure: Source_exons: 1 92
      362 485
      875 1033
      1079 1173
      1220 1376
  DB_info: Database: SwissProt UniProtAcc B7WN96
        UniProtIsoformAcc B7WN96-3
      UniProt UniProtAcc B7WN96
      UniProt_GCRP UniProtAcc B7WN96
      AlphaFold entry B7WN96
      NCBI_protein GI_number GI:313006911
    Protein_id: CHROMOSOME_X CBY25184 1
    DB_remark: ELT-3 protein; contains similarity to Pfam domain PF00320 (GATA zinc finger); contains similarity to Interpro domains IPR039355 (Transcription factor GATA), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Feature_evidence: WBsf204599
        WBsf204481
  Visible: Gene: WBGene00001251
    Corresponding_transcript: K02B9.4c.1
    Corresponding_protein: CE06061
    Corresponding_PCR_product: cenix:88-g9
      mv_AAD33964
      sjj_K02B9.4
    Corresponding_oligo_set (13)
    Matching_cDNA: male_Nanopore_Roach_106043
      adult_Nanopore_Roach_22359
      adult_Nanopore_Roach_42189
      L1_Nanopore_Roach_66319
      L2_Nanopore_Roach_47333
      L2_Nanopore_Roach_43889
      L1_Nanopore_Roach_42870
      L4_Nanopore_Roach_30250
    RNAi_result (49)
    Microarray_results (15)
    Brief_identification: Transcription factor elt-3 Accession_evidence: UniProt SP:B7WN96
    RNASeq_FPKM (74)
    Last_reviewed: 04 Nov 2010 00:00:00 WBPerson1983
    Remark: [101104 pad] Added this alternate Isoform based on SL1 feature data as identified by RNASeq deep sequencing. Curator_confirmed: WBPerson1983
        Feature_evidence: WBsf204599
          WBsf204481
        From_analysis: RNASeq_Hillier_elegans
  Method: curated