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WormBase Tree Display for CDS: K01C8.1

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Name Class

K01C8.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceK01C8
StructureSource_exons151
303495
549667
7251030
10871305
13921544
15942052
DB_infoDatabaseTrEMBLUniProtAccQ21080
UniProtUniProtAccQ21080
UniProt_GCRPUniProtAccQ21080
AlphaFoldentryQ21080
NCBI_proteinGI_numberGI:50507470
TREEFAMTREEFAM_IDTF314863
Protein_idCHROMOSOME_IICAA888542
DB_remarkSRDH-1 protein; contains similarity to Pfam domains PF00291 (Pyridoxal-phosphate dependent enzyme), PF01842 (ACT domain); contains similarity to Interpro domains IPR005789 (Threonine dehydratase, catabolic), IPR002912 (ACT domain), IPR036052 (Tryptophan synthase beta chain-like, PALP domain superfamily), IPR001926 (Tryptophan synthase beta chain-like, PALP domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00010456
Corresponding_transcriptK01C8.1.1
K01C8.1.2
Corresponding_proteinCE36943
Corresponding_PCR_productcenix:140-f2
mv_G_YK7386
sjj_K01C8.1
Corresponding_oligo_set (17)
Matching_cDNA (80)
RNAi_resultWBRNAi00033544
WBRNAi00075854
WBRNAi00016385
WBRNAi00049602
Microarray_results (19)
Brief_identificationL-serine deaminaseAccession_evidenceUniProtTR:Q21080
RNASeq_FPKM (74)
Last_reviewed24 Jun 2004 00:00:00WBPerson1983
Remark[040624 pad] Gene prediction altered to represent new EST data, altered splicing of intron 5, also made confirmed intron 5' of prediction UTR.Accession_evidenceNDBBJ778752
Curator_confirmedWBPerson1983
Associated_featureWBsf008687
Methodcurated