WormBase Tree Display for CDS: H04M03.3
expand all nodes | collapse all nodes | view schema
| H04M03.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | H04M03 | |||
| Structure | Source_exons | 1 | 291 | |||
| 507 | 592 | |||||
| 638 | 820 | |||||
| 1178 | 1619 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9TYR0 | ||
| UniProt | UniProtAcc | Q9TYR0 | ||||
| UniProt_GCRP | UniProtAcc | Q9TYR0 | ||||
| AlphaFold | entry | Q9TYR0 | ||||
| NCBI_protein | GI_number | GI:351049683 | ||||
| TREEFAM | TREEFAM_ID | TF318511 | ||||
| Protein_id | CHROMOSOME_IV | CCD63379 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00019153 | ||||
| Corresponding_transcript | H04M03.3.1 | |||||
| Corresponding_protein | CE20922 | |||||
| Corresponding_PCR_product | cenix:140-b1 | |||||
| mv_H04M03.3 | ||||||
| sjj_H04M03.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (23) | ||||||
| RNAi_result | WBRNAi00016188 | |||||
| WBRNAi00033662 | ||||||
| WBRNAi00108556 | ||||||
| WBRNAi00049291 | ||||||
| WBRNAi00108631 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | DeHydrogenases, Short chain | Accession_evidence | UniProt | TR:Q9TYR0 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 09 Oct 2013 00:00:00 | WBPerson4025 | ||||
| Method | curated |
