WormBase Tree Display for CDS: F57C7.3b
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| F57C7.3b | SMap | S_parent | Sequence | F57C7 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 153 | |||
| 420 | 522 | |||||
| 656 | 756 | |||||
| 811 | 1022 | |||||
| 1169 | 1287 | |||||
| 2749 | 2924 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q8I4H9 | ||
| UniProt | UniProtAcc | Q8I4H9 | ||||
| AlphaFold | entry | Q8I4H9 | ||||
| NCBI_protein | GI_number | GI:25809234 | ||||
| Protein_id | CHROMOSOME_X | CAD44142 | 1 | |||
| DB_remark | SDN-1 protein; contains similarity to Pfam domain PF01034 (Syndecan domain); contains similarity to Interpro domains IPR001050 (Syndecan), IPR027789 (Syndecan/Neurexin domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | C46650 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00004749 | ||||
| Corresponding_transcript | F57C7.3b.1 | |||||
| Corresponding_protein | CE32681 | |||||
| Corresponding_PCR_product | cenix:87-a5 | |||||
| mv_F57C7.3 | ||||||
| sjj2_F57C7.3a | ||||||
| sjj_F57C7.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (24) | ||||||
| RNAi_result | WBRNAi00109528 | |||||
| WBRNAi00109334 | ||||||
| WBRNAi00048861 | ||||||
| WBRNAi00102205 | ||||||
| WBRNAi00109237 | ||||||
| WBRNAi00065732 | ||||||
| WBRNAi00033032 | ||||||
| WBRNAi00109625 | ||||||
| WBRNAi00109431 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Syndecan | Accession_evidence | UniProt | TR:Q8I4H9 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
