WormBase Tree Display for CDS: F56B3.1
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| F56B3.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56B3 | |||
| Structure | Source_exons | 1 | 144 | |||
| 241 | 1212 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O45114 | ||
| UniProt | UniProtAcc | O45114 | ||||
| UniProt_GCRP | UniProtAcc | O45114 | ||||
| AlphaFold | entry | O45114 | ||||
| NCBI_protein | GI_number | GI:351063715 | ||||
| TREEFAM | TREEFAM_ID | TF316783 | ||||
| Protein_id | CHROMOSOME_IV | CCD71939 | 1 | |||
| DB_remark | COL-103 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000677 | ||||
| Corresponding_transcript | F56B3.1.1 | |||||
| Corresponding_protein | CE17882 | |||||
| Corresponding_PCR_product | cenix:185-d5 | |||||
| mv_F56B3.1 | ||||||
| sjj_F56B3.1 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (863) | ||||||
| RNAi_result | WBRNAi00032926 | |||||
| WBRNAi00114422 | ||||||
| WBRNAi00027371 | ||||||
| WBRNAi00015778 | ||||||
| WBRNAi00048626 | ||||||
| WBRNAi00025696 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:O45114 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 19 Aug 2013 00:00:00 | WBPerson4025 | ||||
| Method | curated |
