WormBase Tree Display for Sequence: F54F7
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| F54F7 | DNA | F54F7 | 42663 | ||
|---|---|---|---|---|---|
| SMap | S_child (11) | ||||
| Structure | From | Source | CHROMOSOME_X | ||
| Overlap_right | Y62H9A | 42560 | |||
| Overlap_left | VF54F7L | ||||
| Clone_left_end | F54F7 | 1 | |||
| Clone_right_end | F54F7 | 42663 | |||
| DB_info | Database | EMBL | NDB_AC | Z67755 | |
| NDB_SV | Z67755.2 | ||||
| DB_remark | [070521] Sequence correction: deletion -1 bases tatttcaagactttcacttcCcgtgcaagctggtgagcta @ 15698 | ||||
| Keyword | HTG | ||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | |||
| Origin | From_author | McMurray AA | |||
| From_laboratory | HX | ||||
| Date_directory | 070521 | ||||
| Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00000001 | ||||
| Visible | Clone | F54F7 | |||
| Properties | Genomic_canonical | ||||
| Checksum | MD5 | b222bfa8e175663608fbb438dafc0fe7 | |||
| Status | Finished | 28 Apr 1995 00:00:00 | |||
| Submitted | 11 Nov 1995 00:00:00 | ||||
| Annotated | 10 Nov 1995 00:00:00 | ||||
| Map | Sequence-X | Ends | Left | 6427 | |
| Right | 6450 | ||||
| Interpolated_map_position | X | 6.73788 | |||
| Assembly_tags | annotation | 6417 | 6629 | Unique region between inverted repeat elements (6470 to 6630bp). Generally poor quality data and missing d.s. (-) data, but terminators done on all available + reads. | |
| 20948 | 21012 | Poor sequence on the -ve strand. Terminated on the +ve strand. | |||
| 27648 | 27658 | only 8 T's in the terminator but 9 in the other reads so left as 9. | |||
| 37111 | 37111 | A single M13 clone has a C in this position. All other clones (6 +/6-) have a G. Edited accordingly. | |||
| 40154 | 40230 | No -ve strand data over bases 40155 - 40231 (76 bp) caused by run of 32 ATs. Terminated on the +ve strand. | |||
| Clone left end | 1 | 4 | left hand end of F54F7 | ||
| Clone right end | 42660 | 42663 | right hand end of F54F7 | ||
| Method | Genomic_canonical |
