WormBase Tree Display for CDS: F54E7.1b
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| F54E7.1b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F54E7 | |||
| Structure | Source_exons | 1 | 157 | |||
| 205 | 791 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q20787 | ||
| UniProtIsoformAcc | Q20787-2 | |||||
| UniProt | UniProtAcc | Q20787 | ||||
| UniProt_GCRP | UniProtAcc | Q20787 | ||||
| AlphaFold | entry | Q20787 | ||||
| NCBI_protein | GI_number | GI:373218584 | ||||
| Protein_id | CHROMOSOME_III | CCD61762 | 1 | |||
| DB_remark | PST-2 protein; contains similarity to Pfam domain PF08449 (UAA transporter family); contains similarity to Interpro domain IPR013657 (SLC35B1-4/HUT1) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Feature_evidence | WBsf023234 | ||||
| Visible | Gene | WBGene00018827 | ||||
| Corresponding_transcript | F54E7.1b.1 | |||||
| Corresponding_protein | CE40069 | |||||
| Corresponding_PCR_product | TH:331H1 | |||||
| cenix:331-h1 | ||||||
| mv_G_YK8883 | ||||||
| sjj_F54E7.1 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | male_Nanopore_Roach_126560 | |||||
| young_adult_Nanopore_Roach_106249 | ||||||
| L2_Nanopore_Roach_84448 | ||||||
| adult_Nanopore_Roach_87970 | ||||||
| L1_Nanopore_Roach_85111 | ||||||
| L3_Nanopore_Roach_79519 | ||||||
| RNAi_result | WBRNAi00048347 | |||||
| WBRNAi00107003 | ||||||
| WBRNAi00106890 | ||||||
| WBRNAi00015639 | ||||||
| WBRNAi00006854 | ||||||
| WBRNAi00033637 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Adenosine 3'-phospho 5'-phosphosulfate transporter 2 | Accession_evidence | UniProt | SP:Q20787 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
