WormBase Tree Display for Sequence: F53F10

F53F10 DNA: F53F10 22729
  SMap: S_child: Gene_child: WBGene00003797 2751 6173
        WBGene00044423 12916 14004
        WBGene00006833 7560 11191
        WBGene00305436 10520 9863
        WBGene00018764 14192 18802
        WBGene00018763 22484 18792
        WBGene00023065 13520 13990
        WBGene00023066 6667 6333
        WBGene00018765 11896 12803
      CDS_child: F53F10.1 22425 18838
        F53F10.2a 16923 18467
        F53F10.2b:wp249 16923 18309
        F53F10.2c 16122 16554
        F53F10.2d 15862 16146
        F53F10.2e:wp270 16731 16766
        F53F10.2f 16696 16812
        F53F10.3 11914 12714
        F53F10.4a 9628 10720
        F53F10.4b 7560 10720
        F53F10.4c 9819 10720
        F53F10.4d 10511 10720
        F53F10.5 2756 6001
        F53F10.8 12927 13359
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g119_x8_I_m 22425 19132
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g9n11_x8_I_p 2756 5998
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g99_x8_I_p 12927 13356
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g3n11_x8_I_p 9628 9745
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g98_x8_I_p 13629 13781
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g11n11_x8_I_p 16923 18464
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g132n11_x8_I_p 7560 10717
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g46n11_x8_I_p 12571 12614
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g26n11_x8_I_p 11914 12711
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g103e2k80_x8_I_p 12927 13356
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g31n11_x8_I_p 12571 12614
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g5n11_x8_I_p 16923 18464
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g15n11_x8_I_p 11914 12711
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g46_x8_I_m 22425 18841
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g52n11_x8_I_p 5692 5872
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g6n11_x8_I_p 9628 10717
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g49n11_x8_I_p 2756 5998
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g14n11_x8_I_p 9628 10717
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g77n11_x8_I_p 5692 5872
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g198_x8_I_p 7560 9745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g83_x8_I_m 22425 18865
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g118_x8_I_p 12927 13356
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g41n11_x8_I_p 11914 12711
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g49n11_x8_I_p 2756 5998
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11_x8_I_p 16923 18464
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g10n11_x8_I_p 11914 12711
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g30n11_x8_I_p 5692 5872
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g22n11_x8_I_p 2756 5998
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g53_x8_I_m 22425 20301
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g90_x8_I_m 20282 19183
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g13n11_x8_I_p 9628 10717
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g11n11_x8_I_p 16923 18464
        RNASEQ_embryo_him-8_20dC_post-L1_g18n11_x8_I_p 2756 5998
        RNASEQ_embryo_him-8_20dC_post-L1_g22n11_x8_I_p 9819 10042
        RNASEQ_embryo_him-8_20dC_post-L1_g13n11_x8_I_p 16923 18464
        RNASEQ_embryo_him-8_20dC_post-L1_g142_x8_I_p 13171 13341
        RNASEQ_embryo_him-8_20dC_post-L1_g33n11_x8_I_p 11914 12711
        RNASEQ_embryo_him-8_20dC_post-L1_g10n11_x8_I_p 9628 10717
        RNASEQ_embryo_him-8_20dC_post-L1_g70_x8_I_m 22425 18841
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g81n11_x8_I_p 5692 5998
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g30n11_x8_I_p 11914 12614
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g63n11_x8_I_p 2751 3174
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g113_x8_I_p 12927 13356
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g85_x8_I_p 3258 5872
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g10n11_x8_I_p 9628 10717
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g29n11_x8_I_p 12571 12711
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g98_x8_I_m 22425 18859
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g12n11_x8_I_p 16923 18464
        RNASEQ_L4_soma_JK1107_no_DNaseI_g147_x8_I_m 1065 737
        RNASEQ_L4_soma_JK1107_no_DNaseI_g59_x8_I_m 22425 18841
        RNASEQ_L4_soma_JK1107_no_DNaseI_g119_x8_I_p 13171 13356
        RNASEQ_L4_soma_JK1107_no_DNaseI_g39n11_x8_I_p 2756 5998
        RNASEQ_L4_soma_JK1107_no_DNaseI_g7n11_x8_I_p 9628 10717
        RNASEQ_L4_soma_JK1107_no_DNaseI_g35n11_x8_I_p 12571 12614
        RNASEQ_L4_soma_JK1107_no_DNaseI_g96n11_x8_I_p 7560 9745
        RNASEQ_L4_soma_JK1107_no_DNaseI_g14n11_x8_I_p 11914 12711
        RNASEQ_L4_soma_JK1107_no_DNaseI_g18n11_x8_I_p 16923 18464
        RNASEQ_L4_soma_JK1107_no_DNaseI_g65n11_x8_I_p 5692 5872
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g122s1k87_x8_I_p 9628 10717
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g19n11_x8_I_p 11914 12711
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g50_x8_I_m 22425 18841
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g14n11_x8_I_p 16923 18464
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g127_x8_I_p 7560 9745
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g103_x8_I_p 12927 13356
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g24n11_x8_I_p 2756 5998
        RNASEQ_early_embryo_g77n11_x8_I_p 11914 12711
        RNASEQ_early_embryo_g11n11_x8t1_I_p 9628 10717
        RNASEQ_early_embryo_g111_x8_I_p 13629 13781
        RNASEQ_early_embryo_g88_x8_I_m 22425 18841
        RNASEQ_early_embryo_g86_x8_I_p 13168 13625
        RNASEQ_early_embryo_g23n11_x8t1_I_p 16923 18464
        RNASEQ_early_embryo_g105_x8_I_p 12927 13356
        RNASEQ_early_embryo_g12n11_x8_I_p 2756 5998
        RNASEQ_early_embryo_g111m1_x8_I_p 13155 13361
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g83n11_x8_I_p 11914 12711
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g95_x8_I_p 12927 13356
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g65_x8t1_I_m 22425 18841
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g28n11_x8t1_I_p 2756 5998
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g9n11_x8_I_p 16923 18464
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g123n11_x8t1_I_p 7560 10717
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g8n11_x8t1_I_p 9628 9745
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g50m2_x8_I_p 12927 13356
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g3n11_x8t1_I_p 9628 10717
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g80_x8_I_p 12927 13133
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g12n11s1k81_x8_I_p 12571 12614
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g3n11e2k96_x8t1_I_p 9799 10043
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g12n11_x8_I_p 11914 12711
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g7n11_x8t1_I_p 16923 18464
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g78m1_x8_I_p 13155 13361
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g31n11_x8t1_I_p 2756 5998
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g65_x8t1_I_m 22425 18841
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g11n11_x8_I_p 16923 18464
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g3n11_x8t1_I_p 9628 10717
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g64_x8_I_m 22425 18841
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g53_x8_I_p 3084 5998
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g85_x8_I_p 12927 13356
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g17n11_x8_I_p 11914 12711
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g11n11_x8t1_I_p 16923 18464
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g13n11_x8_I_p 11914 12711
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g96_x8t1_I_m 22425 18841
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g24n11_x8_I_p 12571 12614
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g64n11_x8t1_I_p 5692 5872
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g23n11_x8t1_I_p 2756 5998
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g5n11_x8t1_I_p 9628 10717
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g86m2_x8_I_p 12927 13356
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g11n11_x8t1_I_p 16923 18464
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g5n11_x8t1_I_p 9628 10717
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g27n11_x8_I_p 12571 12614
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g12n11_x8_I_p 11914 12711
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g98_x8_I_p 12927 13356
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g76_x8t1_I_m 22425 18841
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g21n11_x8_I_p 2756 5998
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g2n11_x8_I_p 9628 10717
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g57n11_x8_I_p 12571 12614
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g45n11_x8_I_p 9819 10042
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g6n11_x8_I_p 2756 5998
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g20n11_x8_I_p 11914 12711
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g132_x8_I_m 22425 19135
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g121_x8_I_p 12927 13356
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g12n11_x8_I_p 16923 18464
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g149_x8_I_m 19818 19201
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g5n11_x8_I_p 2756 5872
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g10n11_x8_I_p 9628 10717
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g38n11_x8_I_p 11914 12711
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g19n11_x8_I_p 9819 10042
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g81_x8_I_p 13168 13625
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g55n11_x8_I_p 12571 12614
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g127_x8_I_m 22425 19822
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g116_x8_I_p 12927 13356
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g44n11_x8_I_p 5692 5998
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g7n11_x8_I_p 16923 18464
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g19n11_x8_I_p 11914 12711
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g124_x8_I_p 12927 13356
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g44n11_x8_I_p 5692 5998
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104_x8_I_p 13629 13781
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g7n11_x8_I_p 16923 18464
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g9n11_x8_I_p 2756 5872
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g133n11s1k50_x8_I_p 9628 9745
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g133n11_x8_I_p 7560 10717
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g130_x8_I_m 22425 19822
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g168_x8_I_p 9628 9745
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g10n11_x8_I_p 16923 18464
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g57n11_x8_I_p 12571 12614
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g18n11_x8_I_p 9819 10042
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g139n11_x8_I_p 7560 10717
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g36n11_x8_I_p 11914 12711
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g125_x8_I_p 12927 13356
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g14n11_x8_I_p 2756 5998
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g82_x8_I_m 22425 18844
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g55n11_x8_I_p 5692 5872
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g61_x8_I_p 12927 13356
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g118_x8_I_m 22425 18868
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g7n11_x8_I_p 11914 12614
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g23n11_x8t1_I_p 2756 5998
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g13n11_x8_I_p 12571 12711
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g15n11_x8_I_p 16923 18464
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g5n11_x8t1_I_p 9628 10717
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g67_x8_I_p 12927 13133
        F53F10.gc1 1473 152
        F53F10.gc2 2756 6001
        F53F10.gc3 9628 10720
        F53F10.gc4 11367 12714
        F53F10.gc5 12927 13665
        F53F10.gc6 16923 18467
        F53F10.gc7 22425 18838
        ContigI.elegans.jigsaw.536.mRNA536 12878 15265
        ContigI.elegans.jigsaw.538.mRNA538 22487 18799
        ContigI.elegans.jigsaw.535.mRNA535 11808 12821
        ContigI.elegans.jigsaw.534.mRNA534 9438 11191
        ContigI.elegans.jigsaw.533.mRNA533 2438 6682
        ContigI.elegans.jigsaw.537.mRNA537 16918 18798
        AG1201_F53F10.5.T2 2756 5104
        AG1201_F53F10.5.T3 2756 6001
        AG1201_F53F10.5.T1 5692 6001
        AG1201_F53F10.4.T8 7560 10720
        AG1201_F53F10.4.T1 8976 10720
        AG1201_F53F10.4.T3 9628 10720
        AG1201_F53F10.4.T2 9819 10720
        AG1201_F53F10.3.T1 11914 12714
        AG1201_F53F10.3.T8 11914 12714
        AG1201_F53F10.8.T1 12927 13136
        AG1201_F53F10.8.T10 12927 13359
        AG1201_F53F10.8.T14 12927 13628
        AG1201_F53F10.8.T13 12927 13665
        AG1201_RIT1P.1351.T1 15214 15501
        AG1201_RIT1P.1072.T1 15823 16146
        AG1201_F53F10.2.T1 16923 18467
        AG1201_F53F10.1.T2 22425 18838
        AG1201_F53F10.1.T1 22425 19798
      Transcript (22)
      Nongenomic: yk370a9 6335 6667
      PCR_product (20)
      Allele (292)
      Oligo_set: Aff_F53F10.1 20373 18838
        Aff_F53F10.2 17817 18467
        Aff_F53F10.3 11914 13665
        Aff_F53F10.4 9673 10720
        Aff_F53F10.5 4742 6001
      Feature_object (451)
      Feature_data: F53F10:Polysome 1 22729
        F53F10:TranscriptionallyActiveRegion 1 22729
        F53F10:ChIPSeqTF 1 22729
        F53F10:TRF 1 22729
        F53F10:Dust 1 22729
        F53F10:inverted 1 22729
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: T03F1 22530
    Overlap_left: C32E8
    Clone_left_end: T03F1 22530
    Clone_right_end: C32E8 200
  DB_info: Database: EMBL NDB_AC FO080750
        NDB_ID _U97191
        NDB_SV FO080750.1
    Secondary_accession: U97191
    DB_remark: The 5' clone is C32E8, 1400 bp overlap; the 3' clone is T03F1, 200 bp overlap. Actual start of this clone is at base position 36384 of C32E8; actual end is at 6359 of T03F1.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Scheet P
    From_laboratory: RW
    Date: 18 Dec 1996 00:00:00
    Date_directory: 960809
    Species: Caenorhabditis elegans
  Visible: Clone: F53F10
  Properties: Genomic_canonical
    Checksum: MD5: a59ef89a4107c557e557c09ba128581a
    Status: Finished
      Submitted: 18 Dec 1996 00:00:00
  Map: Sequence-I
  Interpolated_map_position: I -2.00677
  Method: Genomic_canonical