WormBase Tree Display for CDS: F53B2.6
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| F53B2.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | |||
| Structure | Source_exons | 1 | 101 | |||
| 179 | 336 | |||||
| 656 | 828 | |||||
| 1232 | 1611 | |||||
| 2683 | 3115 | |||||
| DB_info | Database | SwissProt | UniProtAcc | G5EEC5 | ||
| UniProt | UniProtAcc | G5EEC5 | ||||
| UniProt_GCRP | UniProtAcc | G5EEC5 | ||||
| AlphaFold | entry | G5EEC5 | ||||
| NCBI_protein | GI_number | GI:3877447 | ||||
| TREEFAM | TREEFAM_ID | TF331863 | ||||
| Protein_id | CHROMOSOME_IV | CAA98132 | 1 | |||
| DB_remark | HAM-1 protein; contains similarity to Pfam domain PF10264 (Winged helix Storkhead-box1 domain); contains similarity to Interpro domains IPR019391 (Storkhead-box protein, winged-helix domain), IPR040126 (Storkhead-box protein 1/2) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001820 | ||||
| Corresponding_transcript | F53B2.6.1 | |||||
| Corresponding_protein | CE17851 | |||||
| Corresponding_PCR_product | cenix:47-b11 | |||||
| mv_F53B2.6 | ||||||
| sjj_F53B2.6 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (35) | ||||||
| RNAi_result (33) | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Stork-head box protein ham-1 | Accession_evidence | UniProt | SP:G5EEC5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 24 Apr 2014 00:00:00 | WBPerson4025 | ||||
| Remark | 960524: Gene continues on overlap with neighbour cosmid ZK795 | |||||
| Method | curated |
