WormBase Tree Display for CDS: F52D10.5
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| F52D10.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F52D10 | |||
| Structure | Source_exons | 1 | 144 | |||
| 729 | 829 | |||||
| 907 | 996 | |||||
| 1055 | 1215 | |||||
| 1271 | 1416 | |||||
| 1789 | 1950 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q20657 | ||
| UniProt | UniProtAcc | Q20657 | ||||
| UniProt_GCRP | UniProtAcc | Q20657 | ||||
| AlphaFold | entry | Q20657 | ||||
| NCBI_protein | GI_number | GI:3877420 | ||||
| Protein_id | CHROMOSOME_X | CAA91476 | 1 | |||
| DB_remark | STO-3 protein; contains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR043202 (Band-7 stomatin-like), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006065 | ||||
| Corresponding_transcript | F52D10.5.1 | |||||
| Corresponding_protein | CE03391 | |||||
| Corresponding_PCR_product | cenix:79-h5 | |||||
| mv_F52D10.5 | ||||||
| sjj_F52D10.5 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_67616 | Inferred_automatically | transcript_builder.pl | |||
| OSTR208H3_2 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR208H3_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_291422 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF208H3_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_265997 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00015398 | |||||
| WBRNAi00032608 | ||||||
| WBRNAi00047965 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Stomatin-3 | Accession_evidence | UniProt | SP:Q20657 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
