WormBase Tree Display for Sequence: F47B10

F47B10 DNA: F47B10 30961
  SMap: S_child: Gene_child (12)
      CDS_child: F47B10.1 12278 10199
        F47B10.2 8497 5861
        F47B10.3 4362 5741
        F47B10.3:wp178 4362 5741
        F47B10.4 3467 3879
        F47B10.5 2644 1329
        F47B10.5:wp131 2644 1316
        F47B10.6 678 1200
        F47B10.6:wp196 678 1067
        F47B10.7 15453 17158
        F47B10.7:wp90 15453 17158
        F47B10.8:wp90 18752 17559
        F47B10.8a 18752 17559
        F47B10.8b 22940 17559
        F47B10.8c 20630 17559
        F47B10.8d 19022 17559
        F47B10.9 26247 24600
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g17_x22_X_m 8497 5864
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g1n11_x22_X_m 12278 10202
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g31n11_x22_X_m 2644 1332
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g16n11_x22_X_m 26247 24603
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g6n11_x22_X_p 15453 16999
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g18n11_x22_X_p 16979 17155
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g16n11m4_x22_X_m 25073 24814
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g75_x22_X_m 19022 18555
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g1n11_x22_X_m 2644 1332
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g39n11_x22_X_p 15453 17155
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g35n11_x22_X_m 18650 17562
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g139_x22_X_m 30633 30399
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g59n11_x22_X_m 26247 24603
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g4n11_x22_X_m 12278 10202
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23_x22_X_m 8497 5864
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g161_x22_X_p 678 800
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11_x22_X_m 26247 24603
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g18n11_x22_X_p 16979 17155
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g54_x22_X_m 8497 5888
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g162_x22_X_p 4960 5078
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g7n11_x22_X_m 2644 1332
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g29s1k167_x22_X_m 18752 18555
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g32_x22_X_m 19022 18950
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g30n11_x22_X_m 18650 18555
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11m4_x22_X_m 25073 24814
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g1n11_x22_X_m 12278 10202
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g180_x22_X_m 30651 30420
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g29_x22_X_m 20579 17562
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g19n11_x22_X_p 15453 16999
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g8n11_x22_X_p 15453 17155
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g77_x22_X_m 25017 24871
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g1n11_x22_X_m 12278 10202
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g7_x22_X_m 8497 5864
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g12n11_x22_X_m 2644 1507
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g71_x22_X_m 1381 1319
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g85_x22_X_m 25122 25027
        RNASEQ_embryo_him-8_20dC_post-L1_g10n11_x22_X_m 12278 10202
        RNASEQ_embryo_him-8_20dC_post-L1_g28_x22_X_m 8497 5864
        RNASEQ_embryo_him-8_20dC_post-L1_g6n11_x22_X_p 15453 17155
        RNASEQ_embryo_him-8_20dC_post-L1_g44n11m4_x22_X_m 26247 24603
        RNASEQ_embryo_him-8_20dC_post-L1_g60_x22_X_m 24855 24814
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g4_x22_X_m 8497 5864
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g1n11_x22_X_m 12278 10202
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g32n11m4_x22_X_m 25073 24814
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3n11_x22_X_p 15453 17155
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g12n11_x22_X_m 2644 1332
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g32n11_x22_X_m 26247 24603
        RNASEQ_L4_soma_JK1107_no_DNaseI_g156_x22_X_m 18281 18104
        RNASEQ_L4_soma_JK1107_no_DNaseI_g235_x22_X_m 17953 17840
        RNASEQ_L4_soma_JK1107_no_DNaseI_g6_x22_X_m 8497 5864
        RNASEQ_L4_soma_JK1107_no_DNaseI_g2n11_x22t1_X_m 12278 10202
        RNASEQ_L4_soma_JK1107_no_DNaseI_g174_x22_X_p 4960 5135
        RNASEQ_L4_soma_JK1107_no_DNaseI_g31n11_x22_X_m 26247 24603
        RNASEQ_L4_soma_JK1107_no_DNaseI_g5n11_x22_X_m 2644 1332
        RNASEQ_L4_soma_JK1107_no_DNaseI_g3n11_x22_X_p 16979 16999
        RNASEQ_L4_soma_JK1107_no_DNaseI_g1n11_x22_X_p 15453 17155
        RNASEQ_L4_soma_JK1107_no_DNaseI_g201_x22_X_m 30901 30760
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g31n11_x22_X_m 26247 24603
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g31n11m4_x22_X_m 25073 24814
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g232_x22_X_m 2644 1736
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g86_x22_X_m 18650 18315
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g5n11_x22_X_m 12278 10202
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g1_x22_X_m 8497 5864
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g73_x22_X_p 4767 5337
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g178_x22_X_p 753 800
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g63_x22_X_m 17953 17562
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g3n11_x22_X_p 15453 17155
        RNASEQ_early_embryo_g6n11_x22t1_X_m 12278 10202
        RNASEQ_early_embryo_g44_x22_X_m 8497 5864
        RNASEQ_early_embryo_g12n11s2k155_x22_X_p 16979 16999
        RNASEQ_early_embryo_g12n11_x22_X_p 15453 17155
        RNASEQ_early_embryo_g42n11m4_x22_X_m 25073 24814
        RNASEQ_early_embryo_g99_x22_X_m 18650 18086
        RNASEQ_early_embryo_g42n11_x22_X_m 26247 24603
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g94_x22_X_m 30440 30309
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g82_x22_X_m 18650 18558
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g63_x22_X_m 24855 24603
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g129_x22_X_m 29002 28940
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g6n11_x22_X_p 15453 17155
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g76_x22_X_m 18284 17562
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g6n11e2k123_x22_X_p 15597 15799
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g30_x22_X_m 8497 5864
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g11n11_x22t1_X_m 12278 10202
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g6n11s2k178_x22_X_p 16979 16999
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g74_x22_X_p 4767 5738
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g50_x22_X_m 25073 24814
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g87_x22_X_m 19022 18555
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g46m4_x22_X_m 26247 24603
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g5n11_x22_X_p 15453 17155
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g77s1k68_x22_X_m 18752 17562
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g7_x22_X_m 8497 5864
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g1n11_x22t1_X_m 12278 10202
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g1n11_x22_X_p 15453 17155
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g153_x22_X_p 4939 5001
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g18_x22_X_m 8497 5864
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g69_x22_X_m 1702 1332
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g82_x22_X_m 18698 17562
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g79_x22_X_m 24855 24603
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g39n11_x22_X_m 26247 24997
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g3n11_x22t1_X_m 12278 10202
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g54n11_x22_X_m 26247 25261
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g110_x22_X_m 25200 24898
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g161_x22_X_m 17953 17786
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g38_x22_X_m 8497 5864
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g255_x22_X_m 18342 18135
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g158_x22_X_m 30440 30375
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g2n11_x22t1_X_m 12278 10202
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g46_x22_X_m 1702 1332
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g1n11s2k80_x22_X_p 16979 16999
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g6n11_x22_X_m 7877 7706
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g1n11_x22_X_p 15453 17155
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g97_x22_X_m 24863 24563
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g38_x22_X_m 1702 1332
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g104_x22_X_m 24863 24563
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g93_x22_X_m 25158 24889
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g16n11_x22_X_m 2644 1736
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g3n11_x22_X_p 15453 17155
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g224_x22_X_p 5338 5435
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g44n11_x22_X_m 26247 25162
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g1n11_x22t1_X_m 12278 10202
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g12_x22_X_m 8497 5864
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g46_x22_X_m 8497 5864
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g2n11_x22t1_X_m 12278 10202
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g8n11_x22_X_p 15453 17155
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g11n11_x22_X_m 26247 24603
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g33n11_x22_X_m 2644 1332
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g11n11m4_x22_X_m 25073 24814
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g26_x22_X_m 8497 5900
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g24n11_x22_X_p 15453 17155
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g4n11_x22t1_X_m 12278 10202
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g51n11_x22_X_m 2644 1483
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g20n11_x22_X_m 26247 24603
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g20n11m4_x22_X_m 25073 24814
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g36n11_x22_X_m 2644 1332
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g3n11_x22t1_X_m 12278 10202
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g2n11_x22_X_p 15453 17155
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g168_x22_X_p 4960 5081
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g21n11m4_x22_X_m 25073 24814
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g4_x22_X_m 8497 5864
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g21n11_x22_X_m 26247 24633
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g8n11_x22_X_p 15453 16999
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g14n11_x22_X_m 2644 1332
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g19n11m4_x22_X_m 25073 24814
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g19n11_x22_X_m 26247 24603
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g167_x22_X_m 17687 17628
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g30n11_x22_X_p 16979 17155
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g18_x22_X_m 8497 5864
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g1n11_x22_X_m 12278 10202
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g3n11_x22_X_p 15453 17155
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g52_x22_X_m 1575 1338
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g1n11_x22t1_X_m 12278 10202
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g5_x22_X_m 8497 5864
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g45_x22_X_m 24855 24603
        F47B10.gc1 2644 1329
        F47B10.gc2 3395 3879
        F47B10.gc3 4878 5741
        F47B10.gc4 8497 5861
        F47B10.gc5 12278 10199
        F47B10.gc6 15453 17158
        F47B10.gc7 22940 17559
        F47B10.gc8 26253 24600
        ContigX.elegans.jigsaw.1714.mRNA1714 8853 5756
        ContigX.elegans.jigsaw.1717.mRNA1717 18792 17351
        ContigX.elegans.jigsaw.1712.mRNA1712 1841 4148
        ContigX.elegans.jigsaw.1716.mRNA1716 15423 17250
        ContigX.elegans.jigsaw.1715.mRNA1715 12342 9848
        ContigX.elegans.jigsaw.1710.mRNA1710 633 1332
        ContigX.elegans.jigsaw.1713.mRNA1713 4293 5828
        ContigX.elegans.jigsaw.1718.mRNA1718 26612 24329
        ContigX.elegans.jigsaw.1711.mRNA1711 2712 1281
        AG1201_F47B10.6.T1 678 1200
        AG1201_F47B10.5.T1 2644 1329
        AG1201_F47B10.4.T1 3467 3879
        AG1201_F47B10.3.T1 4359 5741
        AG1201_F47B10.2.T10 8497 5861
        AG1201_F47B10.2.T1 8497 6129
        AG1201_F47B10.2.T4 8497 6129
        AG1201_F47B10.1.T1 12278 10199
        AG1201_F47B10.7.T5 15451 17158
        AG1201_F47B10.7.T3 15453 17158
        AG1201_F47B10.7.T2 15569 15802
        AG1201_F47B10.7.T1 16979 17158
        AG1201_F47B10.8.T10 17953 17559
        AG1201_F47B10.8.T11 19022 17559
        AG1201_F47B10.8.T12 19354 17559
        AG1201_F47B10.8.T15 20630 17559
        AG1201_F47B10.8.T16 20630 17559
        AG1201_F47B10.8.T3 22940 17559
        AG1201_F47B10.8.T1 18752 18088
        AG1201_F47B10.9.T1 26247 24600
        AG1201_F47B10.9.T5 27326 24600
        AG1201_F47B10.9.T6 27326 24600
        AG1201_F47B10.9.T7 27326 24600
        AG1201_F47B10.9.T8 27326 24600
      Transcript (15)
      PCR_product (34)
      Allele (413)
      Oligo_set: Aff_F47B10.1 11150 10199
        Aff_F47B10.2 6616 5861
        Aff_F47B10.3 5046 5741
        Aff_F47B10.4 3467 3879
        Aff_F47B10.5 2644 1316
        Aff_F47B10.6 678 1067
        Aff_F47B10.7 15453 17158
        Aff_F47B10.8 18587 17559
        Aff_F47B10.9 26190 24600
      Feature_object (255)
      Feature_data: F47B10:Polysome 1 30961
        F47B10:TranscriptionallyActiveRegion 1 30961
        F47B10:ChIPSeqTF 1 30961
        F47B10:TRF 1 30961
        F47B10:Dust 1 30961
        F47B10:inverted 1 30961
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: T21B6 30858
    Overlap_left: T21E8
    Clone_left_end: F47B10 1
      T21B6 30858
    Clone_right_end: T21E8 4407
  DB_info: Database: EMBL NDB_AC Z68004
        NDB_SV Z68004.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Harris BR
    From_laboratory: HX
    Date_directory: 950713
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F47B10
  Properties: Genomic_canonical
    Checksum: MD5: fa14421f3aaaad0b78bb2d5929b43b00
    Status: Finished: 13 Jul 1995 00:00:00
      Submitted: 21 Nov 1995 00:00:00
      Annotated: 20 Nov 1995 00:00:00
  Map: Sequence-X Ends: Left: 5876
        Right: 5901
  Interpolated_map_position: X 2.68292
  Assembly_tags: Finished Left 1 4
    Clone left end 1 4 F47B10
      30858 30861 T21B6
    Clone right end 4404 4407 T21E8
    Finished Right 30958 30961
  Method: Genomic_canonical