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WormBase Tree Display for CDS: F47B10.2

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Name Class

F47B10.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF47B10
StructureSource_exons (11)
DB_infoDatabaseKEGGKEGG_id4.3.1.3
SwissProtUniProtAccQ20502
UniProtUniProtAccQ20502
UniProt_GCRPUniProtAccQ20502
AlphaFoldentryQ20502
NCBI_proteinGI_numberGI:3877284
TREEFAMTREEFAM_IDTF313824
Protein_idCHROMOSOME_XCAA919821
DB_remarkHALY-1 protein; contains similarity to Pfam domains PF00221 (Aromatic amino acid lyase), PF12053 (N-terminal of Par3 and HAL proteins); contains similarity to Interpro domains IPR021922 (Par3/HAL, N-terminal), IPR005921 (Histidine ammonia-lyase), IPR008948 (L-Aspartase-like), IPR024083 (Fumarase/histidase, N-terminal), IPR001106 (Aromatic amino acid lyase)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00009813
Corresponding_transcriptF47B10.2.1
Corresponding_proteinCE03352
Corresponding_PCR_productcenix:244-a5
mv_F47B10.2
sjj_F47B10.2
Corresponding_oligo_set (21)
Matching_cDNA (213)
RNAi_resultWBRNAi00015146
WBRNAi00047595
WBRNAi00032403
Microarray_results (22)
Brief_identificationHistidine ammonia-lyaseAccession_evidenceUniProtSP:Q20502
RNASeq_FPKM (74)
Methodcurated