WormBase Tree Display for CDS: F47B10.2
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F47B10.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F47B10 | |||
Structure | Source_exons (11) | |||||
DB_info | Database | KEGG | KEGG_id | 4.3.1.3 | ||
SwissProt | UniProtAcc | Q20502 | ||||
UniProt | UniProtAcc | Q20502 | ||||
UniProt_GCRP | UniProtAcc | Q20502 | ||||
AlphaFold | entry | Q20502 | ||||
NCBI_protein | GI_number | GI:3877284 | ||||
TREEFAM | TREEFAM_ID | TF313824 | ||||
Protein_id | CHROMOSOME_X | CAA91982 | 1 | |||
DB_remark | HALY-1 protein; contains similarity to Pfam domains PF00221 (Aromatic amino acid lyase), PF12053 (N-terminal of Par3 and HAL proteins); contains similarity to Interpro domains IPR021922 (Par3/HAL, N-terminal), IPR005921 (Histidine ammonia-lyase), IPR008948 (L-Aspartase-like), IPR024083 (Fumarase/histidase, N-terminal), IPR001106 (Aromatic amino acid lyase) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00009813 | ||||
Corresponding_transcript | F47B10.2.1 | |||||
Corresponding_protein | CE03352 | |||||
Corresponding_PCR_product | cenix:244-a5 | |||||
mv_F47B10.2 | ||||||
sjj_F47B10.2 | ||||||
Corresponding_oligo_set (21) | ||||||
Matching_cDNA (213) | ||||||
RNAi_result | WBRNAi00015146 | |||||
WBRNAi00047595 | ||||||
WBRNAi00032403 | ||||||
Microarray_results (22) | ||||||
Brief_identification | Histidine ammonia-lyase | Accession_evidence | UniProt | SP:Q20502 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |