WormBase Tree Display for Sequence: F46F2
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F46F2 | DNA | F46F2 | 37248 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (13) | ||||
CDS_child (181) | ||||||
Transcript (19) | ||||||
Pseudogene | F46F2.1 | 8816 | 11884 | |||
F46F2.4 | 15604 | 17020 | ||||
F46F2.t1 | 6980 | 7050 | ||||
Nongenomic | yk223f3 | 17682 | 18258 | |||
PCR_product (14) | ||||||
Allele (681) | ||||||
Oligo_set | Aff_F46F2.1 | 11285 | 11884 | |||
Aff_F46F2.2 | 29511 | 27372 | ||||
Aff_F46F2.3 | 18258 | 17761 | ||||
Aff_F46F2.4 | 16419 | 17018 | ||||
Feature_object (352) | ||||||
Feature_data | F46F2:Polysome | 1 | 37248 | |||
F46F2:TranscriptionallyActiveRegion | 1 | 37248 | ||||
F46F2:ChIPSeqTF | 1 | 37248 | ||||
F46F2:TRF | 1 | 37248 | ||||
F46F2:Dust | 1 | 37248 | ||||
F46F2:inverted | 1 | 37248 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | C02D4 | 37148 | ||||
Overlap_left | F39B1 | |||||
Clone_left_end | F46F2 | 1 | ||||
C02D4 | 22481 | |||||
Clone_right_end | F39B1 | 21038 | ||||
F46F2 | 37248 | |||||
DB_info | Database | EMBL | NDB_AC | Z69903 | ||
NDB_SV | Z69903.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Thomas K | ||||
From_laboratory | HX | |||||
Date_directory | 951023 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | F46F2 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | c391e0fbea628372a58db93d02e7b2d0 | ||||
Status | Finished | 23 Oct 1995 00:00:00 | ||||
Submitted | 05 Mar 1996 00:00:00 | |||||
Annotated | 01 Mar 1996 00:00:00 | |||||
Map | Sequence-X | Ends | Left | 8300 | ||
Right | 8316 | |||||
Interpolated_map_position | X | 22.3049 | ||||
Assembly_tags | annotation | 5491 | 5491 | next 50 bases are covered by a single read only. This region marks the loop of an inverted reeat | ||
5509 | 5512 | The sequence over these 4 bases is not totally clear. | ||||
5539 | 5539 | preceding 50bp (loop of inverted repeat) are covered by a single read only | ||||
6486 | 6486 | pt mutation T > G on single read | ||||
Finished_left | 1 | 1 | F46F2 | |||
Finished_right | 37248 | 37248 | F46F2 | |||
Clone_left_end | 1 | 4 | F46F2 | |||
Clone_right_end | 21035 | 21038 | F39B1 | |||
37245 | 37248 | F46F2 | ||||
Method | Genomic_canonical |