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WormBase Tree Display for CDS: F46A9.4

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Name Class

F46A9.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF46A9
StructureSource_exons181
263532
578751
DB_infoDatabaseTrEMBLUniProtAccG5EDD8
UniProtUniProtAccG5EDD8
UniProt_GCRPUniProtAccG5EDD8
AlphaFoldentryG5EDD8
NCBI_proteinGI_numberGI:3877214
TREEFAMTREEFAM_IDTF354233
Protein_idCHROMOSOME_ICAB031081
DB_remarkSKR-2 protein; contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (S-phase kinase-associated protein 1-like), IPR036296 (SKP1-like, dimerisation domain superfamily), IPR016072 (SKP1 component, dimerisation), IPR016897 (S-phase kinase-associated protein 1), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR016073 (SKP1 component, POZ domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004808
Corresponding_transcriptF46A9.4.1
Corresponding_proteinCE10578
Corresponding_PCR_productcenix:16-h1
mv_F46A9.4
sjj_F46A9.4
Corresponding_oligo_set (15)
Matching_cDNA (29)
RNAi_result (69)
Microarray_results (16)
Brief_identificationSkp1-related proteinAccession_evidenceUniProtTR:G5EDD8
RNASeq_FPKM (74)
Remark961023: Prosite signature for ATP/GTP binding domain (PS00017)
Methodcurated