WormBase Tree Display for Sequence: F40E10

F40E10 DNA: F40E10 27017
  SMap: S_child: Gene_child (13)
      CDS_child: F40E10.1 20274 16828
        F40E10.2 13304 12559
        F40E10.3 5187 8477
        F40E10.5 22172 23829
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g6n11_x30_X_m 25006 24503
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g29n11e6k119_x30_X_m 25006 24971
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g207_x30_X_p 2865 2915
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g30n11_x30_X_m 24555 24089
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g124_x30_X_p 1429 1559
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g105_x30_X_p 23417 23719
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g59_x30_X_m 19945 16831
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g140_x30_X_p 2036 2119
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g97_x30_X_m 12611 11263
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g9n11_x30_X_p 5187 6520
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g109_x30_X_m 20274 19973
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g139_x30_X_p 23101 23382
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g24n11_x30_X_p 6451 8474
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g119_x30_X_m 13151 12951
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g58n11_x30_X_m 24555 24385
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g116_x30_X_p 547 651
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g2n11_x30_X_p 5187 8474
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g115_x30_X_p 1833 1954
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g7n11_x30_X_p 6451 6520
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g99_x30_X_p 2888 3333
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g39_x30_X_m 13139 12562
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g89_x30_X_p 2036 2784
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g72_x30_X_p 1401 1781
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11_x30_X_m 25006 24636
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g3n11_x30_X_p 5187 8474
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g11n11e4k64_x30_X_m 25933 25737
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g63_x30_X_m 13304 12562
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g66_x30_X_p 22172 23826
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g8n11_x30_X_p 6451 6520
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g157_x30_X_m 18967 18854
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g13n11_x30_X_m 25188 24976
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g119_x30_X_m 17135 16950
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g7n11_x30_X_m 25006 24503
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g32_x30_X_m 11285 11193
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g7n11_x30_X_m 25006 24636
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g72_x30_X_p 8251 8432
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g45_x30_X_m 13031 12562
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g78_x30_X_p 7511 7745
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g36n11_x30_X_p 5187 7219
        RNASEQ_embryo_him-8_20dC_post-L1_g36_x30_X_m 13139 12562
        RNASEQ_embryo_him-8_20dC_post-L1_g5_x30_X_m 20274 16831
        RNASEQ_embryo_him-8_20dC_post-L1_g26_x30_X_p 23524 23826
        RNASEQ_embryo_him-8_20dC_post-L1_g8n11_x30_X_m 25006 24503
        RNASEQ_embryo_him-8_20dC_post-L1_g24n11_x30_X_p 5187 8474
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g82_x30_X_p 1401 2026
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g137_x30_X_p 23519 23761
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g105_x30_X_p 3196 3333
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g5n11e6k120_x30_X_m 25006 24971
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g4n11_x30_X_p 5187 8474
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g130_x30_X_p 23365 23514
        RNASEQ_L4_soma_JK1107_no_DNaseI_g28n11_x30_X_m 24555 24385
        RNASEQ_L4_soma_JK1107_no_DNaseI_g154_x30_X_p 2036 2715
        RNASEQ_L4_soma_JK1107_no_DNaseI_g204_x30_X_p 1268 1368
        RNASEQ_L4_soma_JK1107_no_DNaseI_g211_x30_X_m 17042 16950
        RNASEQ_L4_soma_JK1107_no_DNaseI_g5n11e6k55_x30_X_m 25006 24971
        RNASEQ_L4_soma_JK1107_no_DNaseI_g21n11m1_x30_X_m 24241 24074
        RNASEQ_L4_soma_JK1107_no_DNaseI_g20n11_x30_X_m 26210 24636
        RNASEQ_L4_soma_JK1107_no_DNaseI_g21n11_x30_X_m 24555 24077
        RNASEQ_L4_soma_JK1107_no_DNaseI_g66_x30_X_p 22172 23826
        RNASEQ_L4_soma_JK1107_no_DNaseI_g3n11_x30_X_p 5187 8474
        RNASEQ_L4_soma_JK1107_no_DNaseI_g86_x30_X_m 13151 12562
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g89_x30_X_p 547 3333
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g8n11_x30_X_m 25006 24636
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g107_x30_X_p 23617 23805
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g37_x30_X_m 11559 11163
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g9n11_x30_X_p 5187 8474
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g31n11_x30_X_m 13304 12562
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g7n11e6k167_x30_X_m 25006 24971
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g79_x30_X_m 17235 16831
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g132_x30_X_m 19786 19674
        RNASEQ_early_embryo_g57_x30_X_m 13304 12562
        RNASEQ_early_embryo_g31n11_x30_X_p 23524 23826
        RNASEQ_early_embryo_g30n11_x30_X_p 5187 8474
        RNASEQ_early_embryo_g6_x30_X_m 20274 16831
        RNASEQ_early_embryo_g61_x30_X_p 22172 23640
        RNASEQ_early_embryo_g7n11_x30_X_m 25006 24636
        RNASEQ_early_embryo_g15n11s6k98_x30_X_m 24555 24059
        RNASEQ_early_embryo_g15n11e6k236_x30_X_m 25006 24971
        RNASEQ_early_embryo_g8n11s6k98_x30_X_m 24555 24385
        RNASEQ_early_embryo_g63n11_x30_X_p 1195 1284
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11m6_x30_X_m 25006 24971
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g17n11_x30_X_p 5187 8474
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g43n11_x30_X_m 13304 12562
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g2_x30_X_m 20274 16831
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g5n11_x30_X_m 25006 24636
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g26_x30_X_p 22172 23826
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g9n11_x30_X_m 25006 24503
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g27n11_x30_X_m 13304 12562
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g15n21_x30_X_m 24555 24385
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g18n11_x30_X_m 25006 24636
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g1n11_x30t1_X_p 5187 8474
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g13n21_x30_X_m 24555 24059
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g48_x30_X_m 11285 11163
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g19_x30_X_p 22172 23826
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g45n11_x30_X_m 13304 12562
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g2n11_x30_X_p 5187 8474
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g5n11_x30_X_m 25006 24503
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g27n11e6k181_x30_X_m 25006 24971
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g8n11_x30_X_p 6451 6520
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g19n11e6k187_x30t1_X_m 25006 24971
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g27n11s6k69_x30t1_X_m 24555 24385
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g76_x30_X_p 2888 3095
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g34_x30_X_p 22172 23826
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g9n11_x30t1_X_m 25006 24503
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g1n11_x30_X_p 5187 8474
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g19n11s6k69_x30t1_X_m 24555 24059
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g99_x30_X_p 3196 3333
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g75_x30_X_m 13139 12562
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g15_x30_X_p 22172 23826
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g22n11s6k51_x30t1_X_m 24555 24385
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g15s2k82_x30_X_p 23524 23640
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g153_x30_X_p 2 246
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g4n11s6k51_x30t1_X_m 24555 24059
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g22n11e6k202_x30t1_X_m 25006 24971
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g1n11_x30_X_p 5187 8474
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g155_x30_X_p 1410 1552
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g149_x30_X_p 641 1282
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g159_x30_X_p 2865 2915
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g148_x30_X_p 2933 3047
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g28n11_x30_X_p 6451 8474
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g76_x30_X_m 20274 19994
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g5n11_x30_X_p 5187 6520
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g209_x30_X_p 2072 2778
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g11n11e6k185_x30_X_m 25006 24971
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g72_x30_X_m 19966 16831
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g128_x30_X_p 23071 23394
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g145_x30_X_p 23524 23787
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g172_x30_X_p 3205 3318
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g124_x30_X_m 13109 12706
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g22n11_x30_X_m 26210 24636
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g8n11_x30_X_m 25006 24503
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g60_x30_X_m 20274 19940
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g203_x30_X_p 23293 23340
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g166_x30_X_p 1401 1457
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g131_x30_X_p 23510 23812
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g43_x30_X_m 19852 16831
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g15n11e6k116_x30_X_m 25006 24971
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g10n11_x30_X_p 5187 8474
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g154_x30_X_p 1658 1757
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g161_x30_X_p 22435 23071
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g15n11m3_x30_X_m 24649 24385
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g124_x30_X_p 1833 1975
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g10n11e6k123_x30_X_m 25006 24971
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g146_x30_X_p 5 171
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g4n11_x30_X_p 5187 8474
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g134_x30_X_m 17042 16944
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g16n11m3_x30_X_m 24555 24385
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g179_x30_X_p 1401 1540
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g58n11_x30_X_m 13304 12562
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g27n11_x30_X_m 24555 24388
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g16n11_x30_X_m 24555 24086
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g15n11_x30_X_m 25098 24083
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g109_x30_X_p 2888 3083
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g135_x30_X_p 3196 3297
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g7n11_x30_X_m 25006 24503
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g164_x30_X_p 1231 1284
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g43_x30_X_m 13139 12562
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g121_x30_X_p 23524 23805
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g16n11e6k102_x30_X_m 25006 24971
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g136_x30_X_p 22405 23044
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g56_x30_X_m 20274 16831
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g171_x30_X_p 80 369
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g3n11_x30_X_p 5187 6520
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g14n11_x30_X_p 6451 8474
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g108_x30_X_p 1429 1595
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g121_x30_X_p 595 651
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g147_x30_X_p 424 543
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g1n11_x30_X_p 5187 8474
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g100_x30_X_p 23524 23574
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g130_x30_X_m 13139 12960
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g118_x30_X_p 2888 3032
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g139_x30_X_p 22335 23070
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g98_x30_X_p 1586 1727
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g21n11e6k140_x30_X_m 25006 24971
        F40E10.gc1 338 3336
        F40E10.gc2 5187 8477
        F40E10.gc3 13304 11009
        F40E10.gc4 20274 16828
        F40E10.gc5 22172 23829
        F40E10.gc6 26916 24500
        ContigX.elegans.jigsaw.2369.mRNA2369 13463 12442
        ContigX.elegans.jigsaw.2370.mRNA2370 20408 16723
        ContigX.elegans.jigsaw.2371.mRNA2371 22099 23994
        ContigX.elegans.jigsaw.2368.mRNA2368 5158 8630
        AG1201_F40E10.4.T2 1195 3219
        AG1201_F40E10.4.T1 1195 3336
        AG1201_F40E10.3.T2 5187 8477
        AG1201_F40E10.3.T1 6451 8477
        AG1201_F40E10.2.T1 13304 12559
        AG1201_F40E10.1.T2 20274 16828
        AG1201_F40E10.1.T1 20274 19946
        AG1201_F40E10.5.T3 22172 23829
        AG1201_F40E10.5.T1 23023 23448
        AG1201_F40E10.5.T2 23524 23829
        AG1201_F40E10.6.T12 24555 24056
      Transcript (14)
      PCR_product (16)
      Allele (567)
      Oligo_set: Aff_F40E10.1 17471 16827
        Aff_F40E10.2 13265 12559
        Aff_F40E10.3 7740 8477
        Aff_F40E10.5 23049 23828
        Aff_F40E10.6 26083 24499
      Feature_object (184)
      Feature_data: F40E10:Polysome 1 27017
        F40E10:TranscriptionallyActiveRegion 1 27017
        F40E10:ChIPSeqTF 1 27017
        F40E10:TRF 1 27017
        F40E10:Dust 1 27017
        F40E10:inverted 1 27017
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: F33C8 26914
    Overlap_left: C26G2
    Clone_left_end: F40E10 1
      F33C8 26914
    Clone_right_end: C26G2 6865
  DB_info: Database: EMBL NDB_AC Z69792
        NDB_SV Z69792.2
    DB_remark: [121025] Sequence correction WBsf268300 : Insertion G1 bases from @ 13590
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Smye R
    From_laboratory: HX
    Date_directory: 951028
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F40E10
    Reference: WBPaper00010909
      WBPaper00015196
      WBPaper00015364
      WBPaper00022656
  Properties: Genomic_canonical
    Checksum: MD5: cea4cf72350420076cae549b765af516
    Status: Finished: 28 Oct 1995 00:00:00
      Submitted: 28 Feb 1996 00:00:00
      Annotated: 27 Feb 1996 00:00:00
  Map: Sequence-X Ends: Left: 7943
        Right: 7965
  Interpolated_map_position: X 19.9746
  Assembly_tags: Clone left end 1 4 F40E10
      26914 26917 F33C8
    Finished Left 1 1 F40E10
    Clone right end 6862 6865 C26G2
    Finished Right 27017 27017 F40E10
  Method: Genomic_canonical