WormBase Tree Display for CDS: F39H12.4
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F39H12.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F39H12 | |||
Structure | Source_exons (16) | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9TXI8 | ||
UniProt | UniProtAcc | Q9TXI8 | ||||
UniProt_GCRP | UniProtAcc | Q9TXI8 | ||||
AlphaFold | entry | Q9TXI8 | ||||
NCBI_protein | GI_number | GI:373219772 | ||||
TREEFAM | TREEFAM_ID | TF327139 | ||||
Protein_id | CHROMOSOME_X | CCD69992 | 1 | |||
DB_remark | IGCM-1 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF07679 (Immunoglobulin I-set domain), PF08205 (CD80-like C2-set immunoglobulin domain), PF13927 (Immunoglobulin domain); contains similarity to Interpro domains IPR013162 (CD80-like, immunoglobulin C2-set), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00018215 | ||||
Corresponding_transcript | F39H12.4.1 | |||||
Corresponding_protein | CE24963 | |||||
Corresponding_PCR_product | cenix:55-a10 | |||||
mv_F39H12.4 | ||||||
sjj2_F39H12.4 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (37) | ||||||
RNAi_result | WBRNAi00046801 | |||||
WBRNAi00031998 | ||||||
Microarray_results (16) | ||||||
Brief_identification | B-cell receptor CD22-like | Accession_evidence | UniProt | TR:Q9TXI8 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |