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WormBase Tree Display for CDS: F39H12.4

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Name Class

F39H12.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF39H12
StructureSource_exons (16)
DB_infoDatabaseTrEMBLUniProtAccQ9TXI8
UniProtUniProtAccQ9TXI8
UniProt_GCRPUniProtAccQ9TXI8
AlphaFoldentryQ9TXI8
NCBI_proteinGI_numberGI:373219772
TREEFAMTREEFAM_IDTF327139
Protein_idCHROMOSOME_XCCD699921
DB_remarkIGCM-1 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF07679 (Immunoglobulin I-set domain), PF08205 (CD80-like C2-set immunoglobulin domain), PF13927 (Immunoglobulin domain); contains similarity to Interpro domains IPR013162 (CD80-like, immunoglobulin C2-set), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00018215
Corresponding_transcriptF39H12.4.1
Corresponding_proteinCE24963
Corresponding_PCR_productcenix:55-a10
mv_F39H12.4
sjj2_F39H12.4
Corresponding_oligo_set (16)
Matching_cDNA (37)
RNAi_resultWBRNAi00046801
WBRNAi00031998
Microarray_results (16)
Brief_identificationB-cell receptor CD22-likeAccession_evidenceUniProtTR:Q9TXI8
RNASeq_FPKM (74)
Methodcurated