WormBase Tree Display for Pseudogene: F35E12.4

F35E12.4 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: F35E12
  Structure: Source_exons: 1 70
      114 220
      283 374
      421 535
      649 749
      796 1021
      1067 1307
      1351 1492
      1775 1882
  DB_info: DB_remark: coding pseudogene
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Type: Coding_pseudogene
  Attributes: SubType: unprocessed_pseudogene
  Visible: Gene: WBGene00009428
    Brief_identification: Pseudogene containing a CUB-like domain Curator_confirmed: WBPerson1983
    Corresponding_PCR_product: cenix:108-e2
      mv_F35E12.4
      sjj_F35E12.4
    Corresponding_oligo_set: 180690_at
      A_12_P108914
      Aff_F35E12.4
      GPL14144_F35E12.4_970-1029_0.933_1_A
      GPL3518_CE09919
      GPL8304_CE_WBGene00009428_A
      GPL8673_F35E12_4P00113
      GPL9450_F35E12.4
      cea2.i.38269
    Variation (77)
    Microarray_results: SMD_F35E12.4
      180690_at
      A_12_P108914
      Aff_F35E12.4
      GPL14144_F35E12.4_970-1029_0.933_1_A
      GPL3518_CE09919
      GPL8304_CE_WBGene00009428_A
      GPL8673_F35E12_4P00113
      GPL9450_F35E12.4
      cea2.i.38269
    RNASeq_FPKM (74)
    Last_reviewed: 30 Nov 2011 00:00:00 WBPerson4025
    Remark: [030826 dl] Modified prediction based on OST data. Added internal exons and an in-frame intron. Curator_confirmed: WBPerson1846
      [030826 dl] Final OST confirmed splice will make this into a pseudogene Curator_confirmed: WBPerson1846
      [080131 gw3] Took a look at this. It is possible that this is a pseudogenic copy of F53E12.7a-d, based on the OST splicing and use of weak splice sites, but this is not certain. Curator_confirmed: WBPerson4025
      [111130 gw3] Converted this to a pseudogene. It has in-frame STOP codons. Curator_confirmed: WBPerson4025
  Method: Pseudogene