WormBase Tree Display for CDS: F33D11.3
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F33D11.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F33D11 | |||
Structure | Source_exons | 1 | 144 | |||
191 | 350 | |||||
711 | 1252 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O44774 | ||
UniProt | UniProtAcc | O44774 | ||||
UniProt_GCRP | UniProtAcc | O44774 | ||||
AlphaFold | entry | O44774 | ||||
NCBI_protein | GI_number | GI:351058706 | ||||
TREEFAM | TREEFAM_ID | TF319073 | ||||
Protein_id | CHROMOSOME_I | CCD66436 | 1 | |||
DB_remark | COL-54 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000631 | ||||
Corresponding_transcript | F33D11.3.1 | |||||
Corresponding_protein | CE09893 | |||||
Corresponding_PCR_product | cenix:237-d2 | |||||
mv_F33D11.3 | ||||||
sjj_F33D11.3 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (14) | ||||||
RNAi_result | WBRNAi00003571 | |||||
WBRNAi00091326 | ||||||
WBRNAi00092233 | ||||||
WBRNAi00031713 | ||||||
WBRNAi00046194 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:O44774 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf132784 | |||||
Method | curated |