WormBase Tree Display for CDS: F21H11.3
expand all nodes | collapse all nodes | view schema
F21H11.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F21H11 | |||
Structure | Source_exons | 1 | 263 | |||
2163 | 2353 | |||||
2599 | 2675 | |||||
3470 | 3616 | |||||
4247 | 4840 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q19691 | ||
UniProt | UniProtAcc | Q19691 | ||||
UniProt_GCRP | UniProtAcc | Q19691 | ||||
AlphaFold | entry | Q19691 | ||||
NCBI_protein | GI_number | GI:351061974 | ||||
Protein_id | CHROMOSOME_III | CCD69847 | 1 | |||
DB_remark | TBX-2 protein; contains similarity to Pfam domain PF00907 (T-box); contains similarity to Interpro domains IPR036960 (T-box superfamily), IPR046360 (T-box transcription factor, DNA-binding domain), IPR008967 (p53-like transcription factor, DNA-binding domain superfamily), IPR001699 (T-box transcription factor), IPR002070 (Transcription factor, Brachyury) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006543 | ||||
Corresponding_transcript | F21H11.3.1 | |||||
Corresponding_protein | CE01245 | |||||
Corresponding_PCR_product | TH:303H8 | |||||
TH:314D7 | ||||||
cenix:303-h8 | ||||||
cenix:314-d7 | ||||||
mv_F21H11.3 | ||||||
sjj_F21H11.3 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (39) | ||||||
RNAi_result (16) | ||||||
Microarray_results (16) | ||||||
Brief_identification | T-box protein 2 | Accession_evidence | UniProt | SP:Q19691 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |